PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 162aa MW: 18855.1 Da PI: 9.9321 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 46 | 6.7e-15 | 10 | 50 | 2 | 42 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 i+n+s r+ tf kRr+g+lKK EL +LC++ ++ iifs XP_021642254.1 10 LISNESARKLTFKKRRAGLLKKLMELTTLCGVIACAIIFSA 50 59*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MGRRKVKHEL ISNESARKLT FKKRRAGLLK KLMELTTLCG VIACAIIFSA YNSSPDIWPS 60 HPEAVSVLEK FKRLPPKKQS KYMMDQESFL TRNISKLNEK LEKQRKKNER IELELIYAKC 120 ITGENLDPLN SLMNMNDISH LLKENLEYMT DRIDAAKDKI EE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 25 | RRKVKHELISNESARKLTFKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22590.2 | 4e-38 | M-type_MADS family protein |