PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642058.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 727aa    MW: 79852.5 Da    PI: 6.0325
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox628.9e-2057112156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     r++ +++t+ q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_021642058.1  57 RKRYHRHTQRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 112
                     789999***********************************************998 PP
2START216.11.2e-672474661206
                     HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                     ela +a++el+++ala+ep+Wv      e +n++e+l+ f+++ +      ++ea+r+s+vv+m++a+lve+l+d++ qW++ +     +a+tle
  XP_021642058.1 247 ELAVAAMEELMRMALAGEPLWVPGEnatEVLNEEEYLRAFPRGIGprplgLRSEASRESAVVIMNHANLVEILMDVN-QWSTAFCgivsRAMTLE 340
                     57899*****************999999**************999********************************.******99999****** PP

                     EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
           START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171
                      +s+g      galq+m+ae+q++splvp R+ +fvRy++q+ +g+w++vdvS+d+ ++ p    + R++++pSg++i++++ng+skv+wveh++
  XP_021642058.1 341 ILSTGvagnynGALQVMTAEFQVPSPLVPtREIYFVRYCKQHVDGTWAVVDVSLDNLRPIP----ISRSRRRPSGCVIQELPNGYSKVIWVEHIE 431
                     ***********************************************************99....69**************************** PP

                     --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     +++r++h+++r+lv+sgla+gak+wva l+rqce+
  XP_021642058.1 432 VDDRSVHNIYRPLVNSGLAFGAKRWVALLDRQCER 466
                     *********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    
MFQANMYESH HMFDMTPKSS ENDLGKLKDD DYETKSGTEN TEAPSGDDQD PNQCPKRKRY  60
HRHTQRQIQE MEAFFKECPH PDDKQRKELS RELGLEPLQV KFWFQNKRTQ MKAHHERTEN  120
AILKAENEKL RAENSRYKEA LSNASCPNCG GPAALGEMSF DEQHLRIENA RLREEIDRIS  180
GIAAKYLGKP LSSLSHLSSH LHSRSHDVGV SSFGAQSDYV GGMYGATDLL RPITTGPTGA  240
EKPMIVELAV AAMEELMRMA LAGEPLWVPG ENATEVLNEE EYLRAFPRGI GPRPLGLRSE  300
ASRESAVVIM NHANLVEILM DVNQWSTAFC GIVSRAMTLE ILSTGVAGNY NGALQVMTAE  360
FQVPSPLVPT REIYFVRYCK QHVDGTWAVV DVSLDNLRPI PISRSRRRPS GCVIQELPNG  420
YSKVIWVEHI EVDDRSVHNI YRPLVNSGLA FGAKRWVALL DRQCERLASS MAINIPAGDL  480
CVITSPEGRK SMLKLAERMV MSFCSGVGAS TAHAWTTLSP TGSDDIRVMT RKSMDDPGRP  540
PGIVLSAATS FWIPVPPKRV FEFLSDENHR REWDILSNGG QVEEMAHIAN GRDPGNSVSL  600
LRVNSANSNQ SNMLILQESC TDSTGSYVIY APVDISAMNI VLSGGDADYV ALLPSGFAIL  660
PDGPAGFSPG GIVDVGSGGA LLTVAFQILV DSVPTAKLSL GSVATVNNLI KCTVERIKTA  720
VTSENNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.10.0HD-ZIP family protein