PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021641661.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 31511.2 Da PI: 4.9898 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50 | 7.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_021641661.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.8e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_021641661.1 70 LTEAEEQLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 699****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHESFH KEPRTEESSS ISQTDNLLPE SGSKNNSSMR ENDGGIVNSE ENSSSSHENC 180 CSDESILLDS ICNDETLLNS LWMDEPPLVD ASWNNNNPPA TDNTNNNGEL GYPYPSWEDN 240 CTWLLDCQDF GVHDFGFDCF DDLEFKSLNA LEMEQKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 3e-97 | MYB family protein |