PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021641654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 340aa MW: 37652 Da PI: 6.2386 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23 | 1.4e-07 | 291 | 323 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_021641654.1 291 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 323 59*****************************87 PP | |||||||
2 | ELK | 32.2 | 2.4e-11 | 244 | 265 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+g+++++++E++ XP_021641654.1 244 ELKHELKQGYKGKIVDIREEIL 265 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 340 aa Download sequence |
MAFQDHVSHE MAFQSPLSAS ASSSASAGPA WLSNAVLRLN NDGLGRSRSE KGGHNNNNNG 60 GEDELIDGSG AGGDNWERAK CKAEILGHPL YEQLLAAHVA CLRIATPVDQ LARIDTQLAQ 120 SQEVVAKYSV LGNGQVVDEK ELDQFMTHYV LLLCSFKDQL QQHVRVHAME AVMACWELEQ 180 SLQSLTGASL GEGTGATMSD DDDDQADSDT NLYDGGLDGA DCMGFGPLVP TESERSLMEH 240 VRKELKHELK QGYKGKIVDI REEILRKRRA GKLPGDTTSL LKAWWQSHSK WPYPTEEDKA 300 RLVQETGLQL KQINNWFINQ RKRNWHSNPS GSTTKSKRKK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 321 | 340 | RKRNWHSNPSGSTTKSKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25220.2 | 1e-158 | TALE family protein |