PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641416.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 589aa MW: 63690.6 Da PI: 7.9186

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.5	3.1e-14	107	146	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C +C N+ e+ XP_021641416.1 107 RQKQCNCKHSRCLKLYCECFASGTYCDG-CNCVNCYNNVEN 146 689***********************.******9875 PP
2	TCR	51.1	2.8e-16	191	230	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_021641416.1 191 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 230 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MGEGEGSEFP PKKTAQSDTQ GSSDFPAKKL ARQLDFTQGN VVLPDHPHSQ QQQPATLPLP 60 QQQQPQAVAM PAAPPSQQLP PTRIIKPESP KSKPRPNTEL KDGTPKRQKQ CNCKHSRCLK 120 LYCECFASGT YCDGCNCVNC YNNVENEAAR REAVEATLER NPNAFRPKIA SSPHGTRDSR 180 EENGEGLVLG KHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCIDCKNFE GSEERQALFH 240 GDHANNIAYI QQAANAAITG AIGSSGYASP PASKKRKGQE LLFGPTAKDQ SFHRLGHFQQ 300 GVHIRPSAPS TSLSTNPVAR AAGTATLGPS KFTYRSLLAD IIQPQDLKEL CSVLVVVSGE 360 AAKTLADQRN ATEKRVGDQA ETSIAFSTQE RLQSQKETDV EKIIAYDCSS ANQVDKVSPN 420 DSSSDGADMP KGRPMSPGTL ALMCDEQDTM FMAAASPIGL TGHGCSATSQ LPCGQGMTEI 480 YAEQERVVLT KFRDCLNRLI TFGEIKETKC SSLARTELGN QRDQLSNGTM NSRAELGNQQ 540 GPYSNGVSKH FIPPTSKTAP IVTSMVATSS NDLPKVPALP QNEDNKPMT

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MGEGEGSEFP PKKTAQSDTQ GSSDFPAKKL ARQLDFTQGN VVLPDHPHSQ QQQPATLPLP  60
QQQQPQAVAM PAAPPSQQLP PTRIIKPESP KSKPRPNTEL KDGTPKRQKQ CNCKHSRCLK  120
LYCECFASGT YCDGCNCVNC YNNVENEAAR REAVEATLER NPNAFRPKIA SSPHGTRDSR  180
EENGEGLVLG KHNKGCHCKK SGCLKKYCEC FQANILCSEN CKCIDCKNFE GSEERQALFH  240
GDHANNIAYI QQAANAAITG AIGSSGYASP PASKKRKGQE LLFGPTAKDQ SFHRLGHFQQ  300
GVHIRPSAPS TSLSTNPVAR AAGTATLGPS KFTYRSLLAD IIQPQDLKEL CSVLVVVSGE  360
AAKTLADQRN ATEKRVGDQA ETSIAFSTQE RLQSQKETDV EKIIAYDCSS ANQVDKVSPN  420
DSSSDGADMP KGRPMSPGTL ALMCDEQDTM FMAAASPIGL TGHGCSATSQ LPCGQGMTEI  480
YAEQERVVLT KFRDCLNRLI TFGEIKETKC SSLARTELGN QRDQLSNGTM NSRAELGNQQ  540
GPYSNGVSKH FIPPTSKTAP IVTSMVATSS NDLPKVPALP QNEDNKPMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-180	CPP family protein