PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641159.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 355aa MW: 41050 Da PI: 10.0286

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw +yl XP_021641159.1 4 RQRWRAEEDALLRAYVKQYGPKEWNLVSQRMNttLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_021641159.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPKEWNLV SQRMNTTLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKTVEP 120 IDEGKYDRIL ETFAEKLVKE RPTPAFVMAT SNGGFLHTDP PPAPTLLPPW LSTSNSTSAV 180 RPPSPSVTLS LSPSTVAAPP PSIPWLQPER GQENTAFVLG SLPPHGSVPG ENLMVSELME 240 CCRELEEGHR AWAAHKKEAA WRLKRVELQL ESEKSCRRRE KMEEIESKIK ALREEQKASL 300 DRIEAEYREQ LAELRRDAET KEQKLAEQWA AKHLRLSKFL EQMVCRPRLA EHNGR

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPKEWNLV SQRMNTTLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENNKTVEP  120
IDEGKYDRIL ETFAEKLVKE RPTPAFVMAT SNGGFLHTDP PPAPTLLPPW LSTSNSTSAV  180
RPPSPSVTLS LSPSTVAAPP PSIPWLQPER GQENTAFVLG SLPPHGSVPG ENLMVSELME  240
CCRELEEGHR AWAAHKKEAA WRLKRVELQL ESEKSCRRRE KMEEIESKIK ALREEQKASL  300
DRIEAEYREQ LAELRRDAET KEQKLAEQWA AKHLRLSKFL EQMVCRPRLA EHNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-151	MYB family protein