PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021641154.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 125aa MW: 14160.3 Da PI: 11.3493 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 93.1 | 3.4e-29 | 18 | 74 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RR R kle+++kl k rkpylheSRh h l+R RgsgGrF XP_021641154.1 18 DGPIYVNAKQYHGILRRRRLRSKLEARNKL-VKRRKPYLHESRHLHVLNRVRGSGGRF 74 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MAGMTTARVP LPLDLADDGP IYVNAKQYHG ILRRRRLRSK LEARNKLVKR RKPYLHESRH 60 LHVLNRVRGS GGRFLSTKKL QQSDPTSTSK MHVVPNGDAI FIQSEHRFSS LVAQQTNGDL 120 MCGET |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 52 | RRRRLRSKLEARNKLVKRRK |
2 | 33 | 53 | RRRRLRSKLEARNKLVKRRKP |
3 | 34 | 53 | RRRRLRSKLEARNKLVKRRK |
4 | 34 | 54 | RRRRLRSKLEARNKLVKRRKP |
5 | 35 | 55 | RRRRLRSKLEARNKLVKRRKP |
6 | 46 | 52 | KLVKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54160.1 | 4e-34 | NF-YA family protein |