PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640899.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 345aa    MW: 38450.1 Da    PI: 8.9629
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.81.4e-31187243158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep++VNaKQy++Il+RR  Rakle+++kl +ksrkpylheSRh hAlrR+RgsgGrF
  XP_021640899.1 187 DEPIFVNAKQYNAILRRRRYRAKLEAQNKL-IKSRKPYLHESRHLHALRRARGSGGRF 243
                     79****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MHKTKPTSIP TYCFSALYRI PKGVSLFLHV FFLDSWWSIR EYSFKLKVIF EHLSSLSEGI  60
GLTMGVSQQN FHGAKKLTFH FQDQDSSSTQ STCQSYPEVA SMGEGFNETH GKAEGGDPKL  120
ASSIGTQDFI FPSQVDYSQS IARFPIHFAE PYFGGLLSAY APQAMIHPQM YGMASSRVPL  180
PPEYTEDEPI FVNAKQYNAI LRRRRYRAKL EAQNKLIKSR KPYLHESRHL HALRRARGSG  240
GRFLNVKKLE ESNTPTSHGL DASGSAELHL AGNTSESEIH QPENHRDGAS TTSCSDITSA  300
SNSDDIFQQP EFKFSGYRSH VVGTMQGRPG GMHVGGSQHR VSVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.15e-66NF-YA family protein