PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021640899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 345aa MW: 38450.1 Da PI: 8.9629 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100.8 | 1.4e-31 | 187 | 243 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep++VNaKQy++Il+RR Rakle+++kl +ksrkpylheSRh hAlrR+RgsgGrF XP_021640899.1 187 DEPIFVNAKQYNAILRRRRYRAKLEAQNKL-IKSRKPYLHESRHLHALRRARGSGGRF 243 79****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MHKTKPTSIP TYCFSALYRI PKGVSLFLHV FFLDSWWSIR EYSFKLKVIF EHLSSLSEGI 60 GLTMGVSQQN FHGAKKLTFH FQDQDSSSTQ STCQSYPEVA SMGEGFNETH GKAEGGDPKL 120 ASSIGTQDFI FPSQVDYSQS IARFPIHFAE PYFGGLLSAY APQAMIHPQM YGMASSRVPL 180 PPEYTEDEPI FVNAKQYNAI LRRRRYRAKL EAQNKLIKSR KPYLHESRHL HALRRARGSG 240 GRFLNVKKLE ESNTPTSHGL DASGSAELHL AGNTSESEIH QPENHRDGAS TTSCSDITSA 300 SNSDDIFQQP EFKFSGYRSH VVGTMQGRPG GMHVGGSQHR VSVLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 5e-66 | NF-YA family protein |