PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640835.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 352aa MW: 39996.5 Da PI: 6.506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4.2e-16	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++ G g+W+ Iar g+ R++k+c++rw +yl XP_021640835.1 21 KGLWSPEEDEKLIKYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYL 68 678*******************************************97 PP
2	Myb_DNA-binding	51.7	2e-16	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ lG++ W+ Ia++++ gRt++++k++w++ XP_021640835.1 74 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNS 117 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MRKPDLMGKE KVSNNKAKLR KGLWSPEEDE KLIKYMLTNG QGCWSDIARN AGLQRCGKSC 60 RLRWINYLRP DLKRGAFSPQ EEELIIHLHS ILGNRWSQIA ARLPGRTDNE IKNFWNSALK 120 KRLKIISNNN NNNPSTTSPN ESDSSEPRDN VIGNLMSMHD HDLMAMCMDS SSSSASIQAM 180 VAGSGNQFDP FSILNNNRFD GTAAAGIFDV PTCLTQVGMG GDGFYSEYGI LENHHNKIGL 240 ERDLCLPPLE SSRSIEEEKE NNNNNNAVTN HSFISMKSNI NHNDNINNHL NDNNSCFNNT 300 DHQHHHHHQR KVEDMFGFEN HWQGDNLRMG EWDLEGLMEN ISSFPCLDFQ VR

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MRKPDLMGKE KVSNNKAKLR KGLWSPEEDE KLIKYMLTNG QGCWSDIARN AGLQRCGKSC  60
RLRWINYLRP DLKRGAFSPQ EEELIIHLHS ILGNRWSQIA ARLPGRTDNE IKNFWNSALK  120
KRLKIISNNN NNNPSTTSPN ESDSSEPRDN VIGNLMSMHD HDLMAMCMDS SSSSASIQAM  180
VAGSGNQFDP FSILNNNRFD GTAAAGIFDV PTCLTQVGMG GDGFYSEYGI LENHHNKIGL  240
ERDLCLPPLE SSRSIEEEKE NNNNNNAVTN HSFISMKSNI NHNDNINNHL NDNNSCFNNT  300
DHQHHHHHQR KVEDMFGFEN HWQGDNLRMG EWDLEGLMEN ISSFPCLDFQ VR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	3e-80	MYB family protein