PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640825.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARR-B
Protein Properties Length: 694aa    MW: 75712.5 Da    PI: 7.0178
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.72.6e-28193246155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  XP_021640825.1 193 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 246
                     79*******************.********************************8 PP
2Myb_DNA-binding38.92e-12195245148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ e++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
   XP_021640825.1 195 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 245
                      678********************************99*************7 PP
3Response_reg75.42.1e-25201281109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl vdD+p+ + ll+++l++ +y +v++ +++ +al +l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++++++ + +  G
  XP_021640825.1  20 VLAVDDDPTCLLLLETLLRRCQY-HVTTSSQAVAALMMLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDPKLVMKGITHG 112
                     799********************.***************888778*******************87754.558********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_021640825.1 113 ACDYLLKPVRMEELKN 128
                     *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MTVEQGIGAP GDQFPIGMRV LAVDDDPTCL LLLETLLRRC QYHVTTSSQA VAALMMLREN  60
KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANS DPKLVMKGIT HGACDYLLKP  120
VRMEELKNIW QHVIRRRKFD NKDCNNFDSQ NKGSGEATGD QKHNKKRKDQ KEDDDEDRDD  180
NRHENEDPTT QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KKILDLMNVE KLTRENVASH  240
LQKYRLYLKR ISTVANQQAN MVAALGSTDA SYLQMGSVNG LGFPNLARTG QFHNAAFRPL  300
PPSGMLGRLN SPAALGIHGL PSTGVIPISH LQTTGHLTDS QSQFQSIVHA GNGGNVLQGM  360
PMPLELDQIQ SNKGNTTTLS VSSGFPDAKI MASCSVSPFL GVANLSVSSG FPDAKIMASC  420
SVSPFLGVAN KSLMLEGNAQ EAQDGQKFGK HSSLAVASLD SGLSSNFLDH GRCNDTWSSA  480
VQSTGVQSNS FALNDCFQQA TPHSSNIRNS MSTMVSQSGN TPHVSSISTL PIHLQDFKAE  540
LQCQIASIRN NARQMINNAP QGWDDQRRDA SCHSNAVCSS INAAIPIPGS PLGQSLDPNN  600
VIFHRTKDFN SARQSNLVDP SLMKHNEFAN LAMESLMRSN EGYVIGQQKP QGSYVSNNFG  660
SLEDLASEMV KQQEDKVTAA GEFGHGAYSH RTCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135168RRRKFDNKDCNNFDSQNKGSGEATGDQKHNKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-129ARR-B family protein