PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640373.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 344aa MW: 39063.1 Da PI: 5.7662

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.9	7.4e-57	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n++k+++t+e++++p+sgsl+L+n++++r+frkDG+ w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+n++fqr XP_021640373.1 13 QEaQTRWLKPAEVLYILQNHDKYQFTQEPPQKPTSGSLFLFNKRVLRFFRKDGHDWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNSNFQR 107 5669***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+ ++++ivlvhy+e XP_021640373.1 108 RSYWMLDPAYQHIVLVHYRE 127 ****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MSKSGYDINV LFQEAQTRWL KPAEVLYILQ NHDKYQFTQE PPQKPTSGSL FLFNKRVLRF 60 FRKDGHDWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSY WMLDPAYQHI 120 VLVHYREIGE GKSTPGSAAQ SSPQFSSAFS PRSISRTTQN RDSTSAVSDL CDPRQTSSSP 180 SSVEVSSEIG TKDNGLETTT GYTSSAKDEV SRFLRSLEEQ LSLNEDSIEE VDPLYSEQGT 240 KNDSELLEFE KQISKKDHYE NLLHGPEYIV NKQCYAEPPG FQMQINNLVH LQDAGDSGKY 300 HQSVQEHADG SKESMSWNEV LEPCRVLSSV EYQVSVHSVT LVCV

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MSKSGYDINV LFQEAQTRWL KPAEVLYILQ NHDKYQFTQE PPQKPTSGSL FLFNKRVLRF  60
FRKDGHDWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSY WMLDPAYQHI  120
VLVHYREIGE GKSTPGSAAQ SSPQFSSAFS PRSISRTTQN RDSTSAVSDL CDPRQTSSSP  180
SSVEVSSEIG TKDNGLETTT GYTSSAKDEV SRFLRSLEEQ LSLNEDSIEE VDPLYSEQGT  240
KNDSELLEFE KQISKKDHYE NLLHGPEYIV NKQCYAEPPG FQMQINNLVH LQDAGDSGKY  300
HQSVQEHADG SKESMSWNEV LEPCRVLSSV EYQVSVHSVT LVCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-66	CAMTA family protein