PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640276.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 274aa    MW: 29617.2 Da    PI: 9.5835
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.66.9e-14106150347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_021640276.1 106 PWSEEEHRIFLLGLHKLGKGDWRGISRNFVTTRTPTQVASHAQKY 150
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGRKCSYCGS IGHNSRTCTF HKESLKLFGV QLNLTFPSSS SSSSSSLVSL TKSSSVDCLS  60
SPSTASSSTC SRSSLATVEE NVDTFSNGYL SDGLLGRTQE RKKGVPWSEE EHRIFLLGLH  120
KLGKGDWRGI SRNFVTTRTP TQVASHAQKY FLRQNSLINK RKRRPSLFDM GSGQSSIEPL  180
NGGISKKTES DNIFGSGFAL KTTEASPSAR HHLSTSPIWL STKPFNSEPT FGATNNPNLQ  240
CAPPDLELKL AAPSSLDQSN TCSSDLLIGA IWAT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160165KRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.12e-49MYB_related family protein