PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640211.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 993aa MW: 111517 Da PI: 7.8512

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.8	1.6e-56	22	138	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e k+rwl+++ei++iL n+++++lt e++++p+ gsl+L++rk +ryfrkDG+ w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n +fqr XP_021640211.1 22 EEaKHRWLRPNEILEILRNYQRFKLTPEPPNQPSAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNDSFQR 116 5669***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcyw+L+ +le+ivlvhy+evk XP_021640211.1 117 RCYWMLDGKLEHIVLVHYREVK 138 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 993 aa Download sequence
MSMAETRRYL PNQPLELEQI VEEAKHRWLR PNEILEILRN YQRFKLTPEP PNQPSAGSLF 60 LFDRKALRYF RKDGHRWRKK KDGKTVREAH EKLKAGSVDV LHCYYAHGED NDSFQRRCYW 120 MLDGKLEHIV LVHYREVKEG YRSGVSYLQA DRSTQVDSPQ PISAASIAQT ASPAFTAQIS 180 YVSSPNRVDW NGQTLSSEVE DVDSRDDVGA SLTEPMIGSL SRNASLLANE VEGLPPGSWF 240 NGVKFDHSTG SSLWTEIPGS SKYAYHVPDQ KFYVGQPRGA DVITRKLTDS RLDGDIPDSV 300 ATGDRLINNV DDQALAAIPQ RLILEHDFNL IPSHFVNHSG SRTTASTAQV DNKPKDGGAS 360 TNELGELKKL DSFGRWMDKE IGGDCDDSLM ASDSGNYWNT LDTENDDKEV SSLSHHMQLD 420 IESLGPSLSQ EQLFSIRDFS PDWAYSGVET KVLIIGTFLG SKKFSSETKW GCMFGEIEVS 480 AEVLTDNVIR CQAPLHATGR VPFYVTCCNR LACSEVREFE YRENPSRVAS MSTSSVQEEE 540 LRFQVRLAKL LHLGQERKWL NCSIDRCDKC KLRSTLYSMR NKISNELARA RESCMVSEVN 600 CTDARDKFIQ SLLSDRLCEW LVCKVHGGGK GPDVLDGEGQ GVIHLTAGLG YEWAMGLIVA 660 ASNNPNFRDA QGRTALHWAS YFGREETVIA LVRLGVDPTA VDDPTPTFPG GKIAADLASS 720 QGHKGIAGFL AEAFLTGHLS SLNIKENVTD TVDATISAEK ATETAAQVAF PLSGGADDQF 780 SLKESLAAVR KSTIAAALIQ AAYRSYSFRY RQFPKSSDDS EVSLDLAALG PLKKDQSRSH 840 FEDYLHSAAV RIQQKYRGWK RRKEFLKIRN RIVKIQAHVR GHRVRRQYKK VIWSVSIVEK 900 AILRWRRKRP GLRGFQVEKL SGDVIQETEK TNEYEFLRIG RKQKFAGVEK ALARVKSMVR 960 DPVARDQYMR LITKSEHLKM SDEGISVSRQ DES

Sequence ? help Back to Top

Protein Sequence Length: 993 aa Download sequence

MSMAETRRYL PNQPLELEQI VEEAKHRWLR PNEILEILRN YQRFKLTPEP PNQPSAGSLF  60
LFDRKALRYF RKDGHRWRKK KDGKTVREAH EKLKAGSVDV LHCYYAHGED NDSFQRRCYW  120
MLDGKLEHIV LVHYREVKEG YRSGVSYLQA DRSTQVDSPQ PISAASIAQT ASPAFTAQIS  180
YVSSPNRVDW NGQTLSSEVE DVDSRDDVGA SLTEPMIGSL SRNASLLANE VEGLPPGSWF  240
NGVKFDHSTG SSLWTEIPGS SKYAYHVPDQ KFYVGQPRGA DVITRKLTDS RLDGDIPDSV  300
ATGDRLINNV DDQALAAIPQ RLILEHDFNL IPSHFVNHSG SRTTASTAQV DNKPKDGGAS  360
TNELGELKKL DSFGRWMDKE IGGDCDDSLM ASDSGNYWNT LDTENDDKEV SSLSHHMQLD  420
IESLGPSLSQ EQLFSIRDFS PDWAYSGVET KVLIIGTFLG SKKFSSETKW GCMFGEIEVS  480
AEVLTDNVIR CQAPLHATGR VPFYVTCCNR LACSEVREFE YRENPSRVAS MSTSSVQEEE  540
LRFQVRLAKL LHLGQERKWL NCSIDRCDKC KLRSTLYSMR NKISNELARA RESCMVSEVN  600
CTDARDKFIQ SLLSDRLCEW LVCKVHGGGK GPDVLDGEGQ GVIHLTAGLG YEWAMGLIVA  660
ASNNPNFRDA QGRTALHWAS YFGREETVIA LVRLGVDPTA VDDPTPTFPG GKIAADLASS  720
QGHKGIAGFL AEAFLTGHLS SLNIKENVTD TVDATISAEK ATETAAQVAF PLSGGADDQF  780
SLKESLAAVR KSTIAAALIQ AAYRSYSFRY RQFPKSSDDS EVSLDLAALG PLKKDQSRSH  840
FEDYLHSAAV RIQQKYRGWK RRKEFLKIRN RIVKIQAHVR GHRVRRQYKK VIWSVSIVEK  900
AILRWRRKRP GLRGFQVEKL SGDVIQETEK TNEYEFLRIG RKQKFAGVEK ALARVKSMVR  960
DPVARDQYMR LITKSEHLKM SDEGISVSRQ DES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-151	CAMTA family protein