PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021639684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 667aa MW: 77185.5 Da PI: 8.2177 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.7 | 7.1e-22 | 60 | 143 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a++++++ ++++w+v ++ leHnH l XP_021639684.1 60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMIRMRLVDSKRWRVLEVTLEHNHLL 143 69*****************************************9988.....99*********************************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 667 aa Download sequence |
MAEAPCGIEQ VPDVELIEHQ KEKDGETTDL HGENGMPEER KEFVPPAVGM EFESYDDAYN 60 YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAMI 120 RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKMGTGNKR KSQSSSDAEV RTIKLYRALV 180 IDAGGTGNSS PNAREVRNFS ELPNQLNLKK GDAQAIYNYL CRMQLTNPNF FYLMDLNDEG 240 HLRNVFWIDA RSRAACGYFS DVIYIDNTYL SSKYEIPLVA LVGINHHGQS VLLGCGLLAG 300 ETTESYIWLF KTWLTCLSGC APQTIITDRC KVLQSAIAEA FPRSHHCFGL SHIMRRVPEK 360 LGGLLNYDAI RKALIKAVYE TLKVIEFEAA WVFMVQRFGV VDHEWLRSLY EDRIRWAPVY 420 LKDTFFAGMS AALPGEALNP FFDRYVHKQT PLKEFLDKYE LALQKKHKEE TNADIESRSL 480 GPMLKTRCSF ELQLSKLYTR EIFKKFQFEV EEMYSCFSTT QIHVDGPIII FLVKERVMSE 540 GNRREIRDYE VLYNRSAGEV RCICSCFNFY GYLCRHALCV LNFNGVEEIP SKYILSRWKK 600 DFKRLYIPDH GSSRVDATDR VQWFNQLYRS ALQVVEEGVI SLDHYGVALQ AFEESLNRVH 660 EVEEKQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G52520.1 | 0.0 | FAR1 family protein |