PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639513.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 487aa MW: 53181.8 Da PI: 6.7855

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	6.1e-17	166	215	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021639513.1 166 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 215 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MLDLNLNAES FESIQNSDSV ALMEKYQYQY PEGSGTSNSS IVNADVSSNE DSCSTRACTC 60 DASNSSNNNT SSMFAFNFDM LKVGGGGGGG NENENVAVVT KEFFPVSNGK GVGGGYGNSF 120 GQGSSSNWID LSFERQQDIG DGEVRVVQPP SQQVKKSRRG PRSRSSQYRG VTFYRRTGRW 180 ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFNLTDYEDD LKQMKNLTKE 240 EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKAYDKAAIK CNGREAVTNF 300 EPSTYKGEMI SEATNEGTDH NLDLNLGISP SLGDGPRENE GRLQFHLGPY DMDSKSSGEN 360 SSALMVGDLP FKGPVASDHP MFWNSGYPSF FPNEERAPDK RIALGSSQGL PNWVWQMHGQ 420 VTATPMTMFS TAASSGFSFS ATPPSAAILP SKPLNQSAQN LCFSPPATMT TGTSHFYYPV 480 KPPQAPP

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MLDLNLNAES FESIQNSDSV ALMEKYQYQY PEGSGTSNSS IVNADVSSNE DSCSTRACTC  60
DASNSSNNNT SSMFAFNFDM LKVGGGGGGG NENENVAVVT KEFFPVSNGK GVGGGYGNSF  120
GQGSSSNWID LSFERQQDIG DGEVRVVQPP SQQVKKSRRG PRSRSSQYRG VTFYRRTGRW  180
ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA IKFRGVDADI NFNLTDYEDD LKQMKNLTKE  240
EFVHILRRQS TGFSRGSSKY RGVTLHKCGR WEARMGQFLG KKAYDKAAIK CNGREAVTNF  300
EPSTYKGEMI SEATNEGTDH NLDLNLGISP SLGDGPRENE GRLQFHLGPY DMDSKSSGEN  360
SSALMVGDLP FKGPVASDHP MFWNSGYPSF FPNEERAPDK RIALGSSQGL PNWVWQMHGQ  420
VTATPMTMFS TAASSGFSFS ATPPSAAILP SKPLNQSAQN LCFSPPATMT TGTSHFYYPV  480
KPPQAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	1e-123	AP2 family protein