PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639495.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 747aa MW: 79365.9 Da PI: 6.3314

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	478	524	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021639495.1 478 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 524 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
MGQALKLKPF TMPLSELVYR LAKGKLDSSQ EKNLTCSTDL SSGPENDFVE LVWENGQIQS 60 SKTRKIQFSG SFPSQTSKIR DKHVGNGSNT KMGRFGAMDS VVGEVPMSVP SVEMGLNPDD 120 DMVPWLNYPI EDPLQHDYCA EFLTELSGVT VNEDSQTNYA SMEKRNCGNQ SVRDPRAASV 180 HNCLSLEQGH MTKVSSKGDV DANRPRTSSS QLNPSPSQQC QTSFPYFRSI VSANNSENIN 240 NLTRHAASGD SIGVPPSGGG FPSVKVQKQV PMSSATNSSL MNFSHFSRPA ALVKANLHNI 300 GTRAGSGVSS IERMASKDKG SIASHSNPAE SILVNPFSGL RKEMSSNCHP VTGSSQVDAK 360 PLDPKPAEES LPAKQPEALD QEDSKNDKNH CQLAESATQG LVDGEKTAEP LVASSSVCSG 420 NSVERVSDEQ TQNLKRKHQE TEESEGPSED VEEESVGAKK AAPARAGTGS KRSRAAEVHN 480 LSERRRRDRI NEKMRALQEL IPNCNKVDKA SMLDEAIEYL KTLQLQVQIM SMGAGLYMPS 540 MMLPPGMPHM HAGHMLPFSP MGAGMGMGIG MGFGMGMPDM IGGSSGCSMV QVPPMHGAHF 600 PGPPMSGPSA LHGMGGSNLP IFGLSTQGYP MPYPCAPLMP TSGGPLLKTT MGLNAVGVAG 660 PMDNLDSAPG SSSKDSIKNI NSQAMQNCGA NSSMNQTSSQ CQVTNERFEQ PALVQNSGQA 720 SEVTDRGAVK SANGNDDAPN GATAGCN

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

MGQALKLKPF TMPLSELVYR LAKGKLDSSQ EKNLTCSTDL SSGPENDFVE LVWENGQIQS  60
SKTRKIQFSG SFPSQTSKIR DKHVGNGSNT KMGRFGAMDS VVGEVPMSVP SVEMGLNPDD  120
DMVPWLNYPI EDPLQHDYCA EFLTELSGVT VNEDSQTNYA SMEKRNCGNQ SVRDPRAASV  180
HNCLSLEQGH MTKVSSKGDV DANRPRTSSS QLNPSPSQQC QTSFPYFRSI VSANNSENIN  240
NLTRHAASGD SIGVPPSGGG FPSVKVQKQV PMSSATNSSL MNFSHFSRPA ALVKANLHNI  300
GTRAGSGVSS IERMASKDKG SIASHSNPAE SILVNPFSGL RKEMSSNCHP VTGSSQVDAK  360
PLDPKPAEES LPAKQPEALD QEDSKNDKNH CQLAESATQG LVDGEKTAEP LVASSSVCSG  420
NSVERVSDEQ TQNLKRKHQE TEESEGPSED VEEESVGAKK AAPARAGTGS KRSRAAEVHN  480
LSERRRRDRI NEKMRALQEL IPNCNKVDKA SMLDEAIEYL KTLQLQVQIM SMGAGLYMPS  540
MMLPPGMPHM HAGHMLPFSP MGAGMGMGIG MGFGMGMPDM IGGSSGCSMV QVPPMHGAHF  600
PGPPMSGPSA LHGMGGSNLP IFGLSTQGYP MPYPCAPLMP TSGGPLLKTT MGLNAVGVAG  660
PMDNLDSAPG SSSKDSIKNI NSQAMQNCGA NSSMNQTSSQ CQVTNERFEQ PALVQNSGQA  720
SEVTDRGAVK SANGNDDAPN GATAGCN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	488	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-53	bHLH family protein