PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021639291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 586aa MW: 64670.2 Da PI: 6.4271 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 78.6 | 6.7e-25 | 124 | 225 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f kvltpsd+++ g +++p+ +a+++ ++ + tlt++d +g sW++++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ ++ XP_021639291.1 124 FAKVLTPSDANNGGGFSVPRFCADSIfpplnyqADPPVQ--TLTVTDIHGFSWNFRHIYRGSPRRHLLTTGWSKFVNHKKLIAGDSVVFM--RNL 214 89*********************999****995444444..9************************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++++++v+r+ XP_021639291.1 215 AGNMFIGVRRA 225 99999*99986 PP | |||||||
2 | Auxin_resp | 83.5 | 4.5e-28 | 273 | 357 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrast.seFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++a+++ +FevvY+Pra++ s+Fvv++e ve+al+v +++GmR++m++etedss+ + +Gtv++ d W++S+Wr+L+ XP_021639291.1 273 AVERAAQGLPFEVVYYPRAGWfSDFVVRAEVVERALSVFWTAGMRVQMEMETEDSSRMTRfQGTVSSAAVRDCGPWRGSPWRMLQ 357 678999*************987*********************************996544**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 586 aa Download sequence |
MPPLPPSTDL RRVNQRIWRA CAGSSVHIPT FNSRVYYFPQ GHLEQSSPSA SPALLSTLAL 60 SRPLILCQIS AVQFLADPVT DEVYAKLLLF PIDPSLNHSL PLLEPCGCLE REGRDDDEDK 120 IVAFAKVLTP SDANNGGGFS VPRFCADSIF PPLNYQADPP VQTLTVTDIH GFSWNFRHIY 180 RGSPRRHLLT TGWSKFVNHK KLIAGDSVVF MRNLAGNMFI GVRRAVRSNN DEDCSRWREQ 240 IGCVTGDVKM KVKEEGFSRS VRGRVSQEAV LAAVERAAQG LPFEVVYYPR AGWFSDFVVR 300 AEVVERALSV FWTAGMRVQM EMETEDSSRM TRFQGTVSSA AVRDCGPWRG SPWRMLQIAW 360 DEPEVLQNAK KVSPWQVEFV APTPPLQAAF PPVKRFKIPE NSGLLTDGDG KLFFPMSGQS 420 NSTVGNMNES LLNYNTFPAG MQGARQNPFP TFGLSNFLRE NASQICPDNV FGSKMVQKLK 480 TVSTELTIGS SQSDNLSLDS QSSMHSFGSE LVANPGSSST KAGISSVQLF GRIIHVNQPV 540 GSGFDDDGCM EDCGSKEYNE NNPLDLALAS ASSYTELLNR IDVQCQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77850.1 | 1e-176 | ARF family protein |