PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639230.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 210aa    MW: 23691 Da    PI: 7.6089
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.22.2e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ey+s
  XP_021639230.1  9 KKIDNHTARQVTFSKRRRGLFKKAYELSTLCDAEIALIVFSATGKLFEYAS 59
                    68***********************************************86 PP
2K-box55.23.1e-19931712199
           K-box  21 lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +a L ke+e+  re+R++ Ge+L+ Ls++eLqqLe+ +e++lk++ ++K + + ++i+ l++ke +l een++L+k+++
  XP_021639230.1  93 SAALSKEVEEKTRELRQMRGEELQGLSIEELQQLEKSVERGLKRVMETKGDAIANEINALKNKEAQLMEENERLKKQMM 171
                     678999999999****************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MTRQKIQIKK IDNHTARQVT FSKRRRGLFK KAYELSTLCD AEIALIVFSA TGKLFEYASS  60
SMTQVIERHN LHPKNIGKLD QPSLELQLKD GTSAALSKEV EEKTRELRQM RGEELQGLSI  120
EELQQLEKSV ERGLKRVMET KGDAIANEIN ALKNKEAQLM EENERLKKQM MNVSVGSSDS  180
MLTNTSSSAD PAQDFDGSDT FLRLGLPFPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.15e-80MIKC_MADS family protein