PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639155.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 292aa    MW: 32825.8 Da    PI: 7.4776
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.65.2e-19129183256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++k+q  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  XP_021639155.1 129 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 183
                     788899***********************************************98 PP
2HD-ZIP_I/II129.71.2e-41129218191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_021639155.1 129 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 218
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MAVEKEDLGL SLSLSFPQNY NSLQLNLMPS LVPSSVISQK PSWNDTFHSS DPNSDSCRAD  60
TRSFLRGIDV NRLPSTADCE EEAGVSSPNS TISSVSGKRS EREGNGEEHE MERDCSRGIS  120
DEEDGDTSRK KLRLSKDQSA ILEESFKEHN TLNPKQKLAL AKQLGLRPRQ VEVWFQNRRA  180
RTKLKQTEVD CEFLKRCCEN LTEENRRLQK EVQELRALKL SPQFYMQMTP PTTLTMCPSC  240
ERVAVPPSAS STVNPSHPRA HPQIGPTHHH RPIPINPWAP AAAPFDALRP RS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1128134SRKKLRL
2178186RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-104HD-ZIP family protein