PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639075.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SRS

Protein Properties

Length: 353aa MW: 36606.2 Da PI: 7.9697

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	216.1	8.2e-67	134	293	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 sg+++CqdCGnqakkdC+h+RCRtCCksrg+dCathv+stWvpaa+rrerq ++aaa a +s +++ k++r +++++++s+t++s+++++ XP_021639075.1 134 SGATTCQDCGNQAKKDCSHRRCRTCCKSRGYDCATHVRSTWVPAARRRERQLMAAAAGGGAGSSGSTSGVKKPRLI-NSQTTTTSHTSTSNTTPP 227 6889*********************************************9999999999999999999999986.788899999***** PP DUF702 98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++++tss lP v+++avf+cvrv++vddge+e+aYq++v+i GhvfkG+LydqG+e XP_021639075.1 228 RSFDTSSshqdasfkeaLPGLVRAQAVFKCVRVTAVDDGEDEYAYQAVVNICGHVFKGFLYDQGVE 293 *999******************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MGMFVVSPAS FNHHHQHQHQ HESTINLATD PINGPNATAT ALGVGVGVGV IPLLTAAPCL 60 PPQNMDDQDL LNNGRNKISG IQFWQPQSSH HHNQSNIRKT TASILDHDNS SANLLQSGNN 120 TSAVAGIGGN SASSGATTCQ DCGNQAKKDC SHRRCRTCCK SRGYDCATHV RSTWVPAARR 180 RERQLMAAAA GGGAGSSGST SGVKKPRLIN SQTTTTSHTS TSNTTPPRSF DTSSSHQDAS 240 FKEALPGLVR AQAVFKCVRV TAVDDGEDEY AYQAVVNICG HVFKGFLYDQ GVEGRDGFPN 300 IAELHLGGAS TGGGGNGGGR NGASSSPIID PSDVYGASGG GLLGGSSYGN PIN

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MGMFVVSPAS FNHHHQHQHQ HESTINLATD PINGPNATAT ALGVGVGVGV IPLLTAAPCL  60
PPQNMDDQDL LNNGRNKISG IQFWQPQSSH HHNQSNIRKT TASILDHDNS SANLLQSGNN  120
TSAVAGIGGN SASSGATTCQ DCGNQAKKDC SHRRCRTCCK SRGYDCATHV RSTWVPAARR  180
RERQLMAAAA GGGAGSSGST SGVKKPRLIN SQTTTTSHTS TSNTTPPRSF DTSSSHQDAS  240
FKEALPGLVR AQAVFKCVRV TAVDDGEDEY AYQAVVNICG HVFKGFLYDQ GVEGRDGFPN  300
IAELHLGGAS TGGGGNGGGR NGASSSPIID PSDVYGASGG GLLGGSSYGN PIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-67	SRS family protein