PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021639065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 520aa MW: 57884.2 Da PI: 9.2482 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.9 | 1.7e-18 | 21 | 75 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t+ q+ +Le+++++++yp++e++ eLAk+++Lte+q++ WF+ rR k+k+ XP_021639065.1 21 KRILKTPAQIMALEKFYNEHNYPTEEMKSELAKQIRLTEKQISSWFCHRRLKDKR 75 78889************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 520 aa Download sequence |
MEDSSEVHSE ENGVSPEKNA KRILKTPAQI MALEKFYNEH NYPTEEMKSE LAKQIRLTEK 60 QISSWFCHRR LKDKRLSKDE TFDRRLSKDD ACANGRQDRS SGLIQDRGSG LWQDSCGSTK 120 QGDYRKVDPK EVESHRLYGH SLPAADVNYD RTSRYTGNVN GVDDTSSESS SSLQDKLFSQ 180 SEDPHDVKTS SYVTQNGASR PSIPKGANNM RYKPSGYLKV KGEIENAAIT AVKRQLGKHY 240 REDGPPLGVE FQPLPPGAFS SSSRDPVDGA FCVGDPARIH SSDVSGVRKQ SSISSRYEVY 300 SSKMISQDSY MEGPNCDLNN ASDSHEKKSR HQLKQKSTSC KFSNSTPGGK SATDNYDDLA 360 AEISIHSGKR NYKLSSKHGA EGIMPDIVSN HHHPDGGKVI SEQTDPWLNA YGNGSPNIVQ 420 KNDCMSKPSN LIPGSSKSLD AQERVLSTRM TKEKLYGEKK GTKEYQDPVR VMKRFKAEFS 480 QECVAKAAFP NMPRNTNSNK GLRQVKREGG LKCKRDHTLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G03250.1 | 1e-84 | HB-other family protein |