PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021638975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 347aa MW: 38521.5 Da PI: 9.9695 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.8 | 2.6e-33 | 130 | 185 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +vrY+eCl+NhAas+Gg +vDGCgEfmps geegt++alkCaAC+CHRnFHR+e + XP_021638975.1 130 SVRYRECLRNHAASMGGLVVDGCGEFMPS-GEEGTQEALKCAACECHRNFHRKEIDG 185 69**************************9.999********************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 347 aa Download sequence |
MELRGQDKEI GMPSSLGYNP PNRDSSYKVP SASIISTFGE RKRDHRHQTA TTQNLEHHPL 60 PLNRQHQTPK PTRDSDLIPD PASASAPLPI AATGATNTTP TPGRSISRSP PPPPPPPPAS 120 TTITTESISS VRYRECLRNH AASMGGLVVD GCGEFMPSGE EGTQEALKCA ACECHRNFHR 180 KEIDGEPPQC AANYYYKNNN QRNTLPLPQQ LATSLPSPQA PPLQYHRYPR GFSFSVCTAP 240 TAPMMMTFGG GGGSGGAESS SEDLNIFQSN LQGVRSKRPS SLKKRFRTKF SQEQKDKMME 300 FAERLGWKIQ KQDEQEVQQF CSRVGVKRKV FKVWMHNNKQ SMKKKQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75240.1 | 5e-59 | ZF-HD family protein |