PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638897.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 757aa MW: 80608.3 Da PI: 6.24

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.5e-16	478	524	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021638897.1 478 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 524 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MGQALKLKPF TMPLSELVYR LAKGKLDSSQ EKNLTCSTDL SSGPENDFVE LVWENGQIQS 60 SKTRKIQFSG SFASQTSKIR DKDVGNGSNT KMGRFGAMDS VVGEVPMSVP SVEMGLNQDD 120 DMVPWLNYPI EDPLQHDYCA EFLTELSGVT VNEDSQTNYA SMEKRNCGNQ SVRDPRAASV 180 HNCLSLEQGH MTKVSSKGDV DANRPRTSSS QLNPSPSQQC QTSFPYFRSI VSANNSENIN 240 NLSRHAASGD SIGVPPSGGG FPSVKVQKQV PMSSATNSSL MNFSHFSRPP ALVKANLHNI 300 GTRAGSGVSS IERMASKDKG SIASHSNPAE SILVNPFSGL RKELSSNCHP VTGSSKVDAK 360 PLDPKPAEES LPAKQPEALD QEDSKNDKNH CQLAESATQG LVDGEKTAEP LVASSSVCSG 420 NSVERVSDEQ TQNLKRKHQE TEESEGPSED VEEDSVGAKK AAPARAGTGS KRSRAAEVHN 480 LSERRRRDRI NEKMRALQEL IPNCNKVDKA SMLDEAIEYL KTLQLQVQIM SMGAGLYMPS 540 MMLPPGMPHM HAGHMLPFSP MGAGMGMGIG MGFGMGMPDM IGGSSGCSMV QVPPMHGAHF 600 PGPPMLGPSA LHGMGGSNLP IFGLSTQGYP MPYPCAPLMP TSGGPLLKTT MGLNAVGVAG 660 PMDNLDSAPG SSSKDSIQNI NSQAMQNCGA NSSMNQTSSQ CQVTNERFEQ PALVQNSGQA 720 SEVPDRGAVK SANGNDDAPN GATSDRLQLT CSFNPCH

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MGQALKLKPF TMPLSELVYR LAKGKLDSSQ EKNLTCSTDL SSGPENDFVE LVWENGQIQS  60
SKTRKIQFSG SFASQTSKIR DKDVGNGSNT KMGRFGAMDS VVGEVPMSVP SVEMGLNQDD  120
DMVPWLNYPI EDPLQHDYCA EFLTELSGVT VNEDSQTNYA SMEKRNCGNQ SVRDPRAASV  180
HNCLSLEQGH MTKVSSKGDV DANRPRTSSS QLNPSPSQQC QTSFPYFRSI VSANNSENIN  240
NLSRHAASGD SIGVPPSGGG FPSVKVQKQV PMSSATNSSL MNFSHFSRPP ALVKANLHNI  300
GTRAGSGVSS IERMASKDKG SIASHSNPAE SILVNPFSGL RKELSSNCHP VTGSSKVDAK  360
PLDPKPAEES LPAKQPEALD QEDSKNDKNH CQLAESATQG LVDGEKTAEP LVASSSVCSG  420
NSVERVSDEQ TQNLKRKHQE TEESEGPSED VEEDSVGAKK AAPARAGTGS KRSRAAEVHN  480
LSERRRRDRI NEKMRALQEL IPNCNKVDKA SMLDEAIEYL KTLQLQVQIM SMGAGLYMPS  540
MMLPPGMPHM HAGHMLPFSP MGAGMGMGIG MGFGMGMPDM IGGSSGCSMV QVPPMHGAHF  600
PGPPMLGPSA LHGMGGSNLP IFGLSTQGYP MPYPCAPLMP TSGGPLLKTT MGLNAVGVAG  660
PMDNLDSAPG SSSKDSIQNI NSQAMQNCGA NSSMNQTSSQ CQVTNERFEQ PALVQNSGQA  720
SEVPDRGAVK SANGNDDAPN GATSDRLQLT CSFNPCH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	483	488	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-52	bHLH family protein