PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638623.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 1782aa MW: 202133 Da PI: 8.6427

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	1691	1713	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk+F ++ +L++H r+H XP_021638623.1 1691 CPvkGCGKTFFSHKYLVQHRRVH 1713 9999*****************99 PP
2	zf-C2H2	11.5	0.00093	1749	1775	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_021638623.1 1749 YVCAeeGCGQTFRFVSDFSRHKRKtgH 1775 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1782 aa Download sequence
MAASGGLVSE PTSQQEVFQW LKNLPLAPEY HPTPAEFQDP IAYIFKIEKE AAKYGICKIV 60 PPVLAAPKKA AIANLNRSLA ARADSSTSKS PPTFTTRQQQ IGFCPRKPRP VQKPVWQSGE 120 NYTFQEFETK AKSFERNYLK KCSKKGALSP LEIETLYWKA TVDKPFSVEY ANDMPGSAFS 180 PKKTGVKEVG EGVTVGETEW NMRVVSRAKG SLLRFMKEEI PGVTSPMVYV AMLFSWFAWH 240 VEDHDLHSLN YLHMGAGKTW YGVPREAAVA FEEVVRVHGY GGEINPLVTF AILGEKTTVM 300 SPEVFISAGV PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRIAKDAAI 360 RRASINYPPM VSHFQLLYDL ALELCTRMPV SISAKPRSSR LKDKQKGEGE RLVKELFVNN 420 VIHNNGLLHV LGKGSSIVLL PRSSSDMSVC SNLRVGSQLR VSSSLGLCSS KGIMKSSKDS 480 VPDEVMPEMN NRINQVKGLF SMKEKFASLC ERNRFSSLNG NDSMHNMDTG TENGGTVHGD 540 KLSDQRLFSC VTCGILSFDC IAIIQPREAA ARYLMSADCS FFNDWIVGSG VTNDGFTIAH 600 GDTHTSEQNS STKWMKKNTV DGLYDVPVQS ANCQIQMIDQ NKVASNTETQ KGTSSLSLLA 660 LNYGNSSDSE EDQVEPDVLH HADEINMLNC SSESTYQHRI SALPSLKQEC HQDEADSRTL 720 SSARPDCGDE VTLQSIDCHA EHGHGNRPAN FKDESDRALN CSVEFETDNL ASMESNGLEH 780 TFRGPMSTSR IASSCSPVVH DTGKAKFNRV VVPRENMDTS FAQRSDEDSS CMHVFCLEHA 840 VEMEQQFRPI GGVHILLLCH PEYPRIEAVA RSVSEELGIE CLWNDINFRD ATKEDEENIQ 900 SALDSEEAIP GNGDWAVKLG INLFYSANLS RSSLYSKQMP YNSVIYNAFG RSSPASSPTK 960 FNVYGRKPSK QKKVVAGRWC GKVWMSNQVH PFLTKRDSED QDQEQERSFR GWTRPDEKLE 1020 IKPEIIYRTE TTLATRKSGR KRKMSVASGP GKEVKCFNTE DAASEDSQED VSCKQHTRVY 1080 SRMQIKRIER EVSYDSLEDY SHQQYGRTHR SKQAKSVERE DANSDDSLRC NTQQHRRTLR 1140 SKQAKSIESE NDVSYALVDN SSRKQHSRIP RTRSNQAKYV ESKSEFSDDS LEGDIHDWHG 1200 RVPRSTQAKF RREDAVSDDS LEESSHRPLR RVHRSKQATY FEKEDAISDD SLENSSLQRN 1260 RRISGASQAK FIERHDEVSD DMLEGSTYQQ HRGSYRNRES KFIDKEGAVS DDLLEDSTCQ 1320 QRMRIFRTKQ AKFVERQNEA SDDSLEDAIQ QQRRVIPRSK RTKFVKREDA VSDDLLEDDT 1380 HLKHRRIPGS RKAKLIERED VSDDLQEDDG QWQSRKTPRG KPAKFIESED GSDDLQDVTH 1440 WQSRKTSRRR QAASIEREDV SDDLEEGNTH WQPKKTHRCK QAKFIERKDV SDDLHEDDTH 1500 WQPRKIPRGK QAKLIEREDA VSDDLLEHNS IKKQRRILRS KQRKPATLRK MKRGAVQHVK 1560 QGTSRLKRRE NLQSIKQDKQ MKQETPRLWN AKGERNTRQF ESRVEEELEG GPSTRLRKRP 1620 SKPSKESETK LKDKLQSSRK KVKSSSAGKP PNGQKSVKNK DEDAEYQCDI EGCAMSFGSK 1680 HELALHKRNI CPVKGCGKTF FSHKYLVQHR RVHLDDRPLK CPWKGCKMTF KWAWARTEHI 1740 RVHTGARPYV CAEEGCGQTF RFVSDFSRHK RKTGHSVKKS RG

Sequence ? help Back to Top

Protein Sequence Length: 1782 aa Download sequence

MAASGGLVSE PTSQQEVFQW LKNLPLAPEY HPTPAEFQDP IAYIFKIEKE AAKYGICKIV  60
PPVLAAPKKA AIANLNRSLA ARADSSTSKS PPTFTTRQQQ IGFCPRKPRP VQKPVWQSGE  120
NYTFQEFETK AKSFERNYLK KCSKKGALSP LEIETLYWKA TVDKPFSVEY ANDMPGSAFS  180
PKKTGVKEVG EGVTVGETEW NMRVVSRAKG SLLRFMKEEI PGVTSPMVYV AMLFSWFAWH  240
VEDHDLHSLN YLHMGAGKTW YGVPREAAVA FEEVVRVHGY GGEINPLVTF AILGEKTTVM  300
SPEVFISAGV PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRIAKDAAI  360
RRASINYPPM VSHFQLLYDL ALELCTRMPV SISAKPRSSR LKDKQKGEGE RLVKELFVNN  420
VIHNNGLLHV LGKGSSIVLL PRSSSDMSVC SNLRVGSQLR VSSSLGLCSS KGIMKSSKDS  480
VPDEVMPEMN NRINQVKGLF SMKEKFASLC ERNRFSSLNG NDSMHNMDTG TENGGTVHGD  540
KLSDQRLFSC VTCGILSFDC IAIIQPREAA ARYLMSADCS FFNDWIVGSG VTNDGFTIAH  600
GDTHTSEQNS STKWMKKNTV DGLYDVPVQS ANCQIQMIDQ NKVASNTETQ KGTSSLSLLA  660
LNYGNSSDSE EDQVEPDVLH HADEINMLNC SSESTYQHRI SALPSLKQEC HQDEADSRTL  720
SSARPDCGDE VTLQSIDCHA EHGHGNRPAN FKDESDRALN CSVEFETDNL ASMESNGLEH  780
TFRGPMSTSR IASSCSPVVH DTGKAKFNRV VVPRENMDTS FAQRSDEDSS CMHVFCLEHA  840
VEMEQQFRPI GGVHILLLCH PEYPRIEAVA RSVSEELGIE CLWNDINFRD ATKEDEENIQ  900
SALDSEEAIP GNGDWAVKLG INLFYSANLS RSSLYSKQMP YNSVIYNAFG RSSPASSPTK  960
FNVYGRKPSK QKKVVAGRWC GKVWMSNQVH PFLTKRDSED QDQEQERSFR GWTRPDEKLE  1020
IKPEIIYRTE TTLATRKSGR KRKMSVASGP GKEVKCFNTE DAASEDSQED VSCKQHTRVY  1080
SRMQIKRIER EVSYDSLEDY SHQQYGRTHR SKQAKSVERE DANSDDSLRC NTQQHRRTLR  1140
SKQAKSIESE NDVSYALVDN SSRKQHSRIP RTRSNQAKYV ESKSEFSDDS LEGDIHDWHG  1200
RVPRSTQAKF RREDAVSDDS LEESSHRPLR RVHRSKQATY FEKEDAISDD SLENSSLQRN  1260
RRISGASQAK FIERHDEVSD DMLEGSTYQQ HRGSYRNRES KFIDKEGAVS DDLLEDSTCQ  1320
QRMRIFRTKQ AKFVERQNEA SDDSLEDAIQ QQRRVIPRSK RTKFVKREDA VSDDLLEDDT  1380
HLKHRRIPGS RKAKLIERED VSDDLQEDDG QWQSRKTPRG KPAKFIESED GSDDLQDVTH  1440
WQSRKTSRRR QAASIEREDV SDDLEEGNTH WQPKKTHRCK QAKFIERKDV SDDLHEDDTH  1500
WQPRKIPRGK QAKLIEREDA VSDDLLEHNS IKKQRRILRS KQRKPATLRK MKRGAVQHVK  1560
QGTSRLKRRE NLQSIKQDKQ MKQETPRLWN AKGERNTRQF ESRVEEELEG GPSTRLRKRP  1620
SKPSKESETK LKDKLQSSRK KVKSSSAGKP PNGQKSVKNK DEDAEYQCDI EGCAMSFGSK  1680
HELALHKRNI CPVKGCGKTF FSHKYLVQHR RVHLDDRPLK CPWKGCKMTF KWAWARTEHI  1740
RVHTGARPYV CAEEGCGQTF RFVSDFSRHK RKTGHSVKKS RG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1630	1641	KLKDKLQSSRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein