PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021638505.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 310aa    MW: 33886 Da    PI: 7.3463
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021638505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.67.7e-102676347
                     SS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqky 47
                      W+ eE++ + +a++ + ++        W++Ia++++ g++  ++k ++q +
   XP_021638505.1 26 TWSREEEKAFENAIATHWTEedeeskeLWEKIASMVP-GKSIQELKQHYQLL 76
                     5************************************.***********965 PP
2Myb_DNA-binding40.56.5e-13153197347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_021638505.1 153 PWTEEEHRLFLLGLNKFGKGDWRSISRNFVISRTPTQVASHAQKY 197
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MHHPFNIFSL LSFIPTDSLN METSITWSRE EEKAFENAIA THWTEEDEES KELWEKIASM  60
VPGKSIQELK QHYQLLVEDV CAIEAGNIPL PNYGGEEATS STKDSHGNSG AVARDKRLNS  120
GYGSGVLGLG HDSSGHGGKG RSRSDQERRK GIPWTEEEHR LFLLGLNKFG KGDWRSISRN  180
FVISRTPTQV ASHAQKYFIR LNSMNRDRRR SSIHDITSVN NGDVSPHQAP ITGQQADTGA  240
AAAIGTVVKL RVQPHMTGLG MYGAPVGHPV APPGHVASAV GTPVMLPPGH HPSYVVPVPY  300
PMAPPQTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-61MYB family protein