PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638383.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 552aa MW: 63407.5 Da PI: 7.063

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.8	3.9e-30	125	210	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_021638383.1 125 RWPRQETLTLLEIRSRLDSRFKEANQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 210 8***********************************999*************************98..55667*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MADHQYDLPD LRQLVAGRTH FQGNPFPFAT EPFFLQTRTH GPQIHHFHHH DSIVAAAAAS 60 AHSGAEVMLP SGFIKLAHDH YCTNATTTTT TAADAAATSS GAAGSFFGVE MESGWIGNDA 120 GNNSRWPRQE TLTLLEIRSR LDSRFKEANQ KGPLWDEVSR IMAEEHGYQR SGKKCREKFE 180 NLYKYYKKTK EGKAGRQDGK HYRFFRQLEA LYGEPSNQTS AASETHLVNT TSFLYQTPTA 240 HTINQENQES FQENKHSESL SFSNISEFET SSSENNDVDL SAVAYMMNGS IEKMKGLSES 300 QSYTRAKKNW KTKVKEFVDL QVRKLGERQE AWMEKMLKTI EDREQERMRR EEEWTKQEVA 360 HLDRIHEFWA KKRAWIEARD AALMDALKKY TAKGLELPSS STSVDEQIAI ATQSHYRNQD 420 RNAKTMDIHG MNTMRWMEPE ILSLIQLRTT MEPRFQESGY SKEGLRECNM TTTECNKKRK 480 EDLRTSNYFQ SVDPYNEQEM AKHDESLNSP SNSYVGSQVH GSRCFHQDPI SGGEHMWNKY 540 GLKLSKEKNQ QL

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MADHQYDLPD LRQLVAGRTH FQGNPFPFAT EPFFLQTRTH GPQIHHFHHH DSIVAAAAAS  60
AHSGAEVMLP SGFIKLAHDH YCTNATTTTT TAADAAATSS GAAGSFFGVE MESGWIGNDA  120
GNNSRWPRQE TLTLLEIRSR LDSRFKEANQ KGPLWDEVSR IMAEEHGYQR SGKKCREKFE  180
NLYKYYKKTK EGKAGRQDGK HYRFFRQLEA LYGEPSNQTS AASETHLVNT TSFLYQTPTA  240
HTINQENQES FQENKHSESL SFSNISEFET SSSENNDVDL SAVAYMMNGS IEKMKGLSES  300
QSYTRAKKNW KTKVKEFVDL QVRKLGERQE AWMEKMLKTI EDREQERMRR EEEWTKQEVA  360
HLDRIHEFWA KKRAWIEARD AALMDALKKY TAKGLELPSS STSVDEQIAI ATQSHYRNQD  420
RNAKTMDIHG MNTMRWMEPE ILSLIQLRTT MEPRFQESGY SKEGLRECNM TTTECNKKRK  480
EDLRTSNYFQ SVDPYNEQEM AKHDESLNSP SNSYVGSQVH GSRCFHQDPI SGGEHMWNKY  540
GLKLSKEKNQ QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	5e-93	Trihelix family protein