PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021638285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 351aa MW: 38496 Da PI: 7.0502 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.2 | 4.8e-32 | 175 | 231 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RR++Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF XP_021638285.1 175 QEPVYVNAKQYQGILRRRKARAKAELEKKL-IKVRKPYLHESRHQHAMRRARGTGGRF 231 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MQSNSESAYR REPDPHVIQP NAVHSEPWWR SFGYNTVPPV VPGENASNLS SPDGPTNGSL 60 SNDDQSLSNE RVNEEDDDAS KESQATASSR SVVNCGQEHR NMHDISSSRT TVHDESLTQP 120 PQLELVGHSI ACASNPYQDP YYSGMMAAYG YQPYSYPHLI GMHHTRMPLP HEMAQEPVYV 180 NAKQYQGILR RRKARAKAEL EKKLIKVRKP YLHESRHQHA MRRARGTGGR FAKKTHIDAS 240 KNSTEGKAND SGPGPSSQSG SSSGSEQLPS DSAEVWIFPH GQQVARASLV NETLEANNRV 300 NGGTCYHNCS GVQTSTHHLH SGEMGEEGDC SGQQRGSISS NQASQRPVAS Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 2e-66 | NF-YA family protein |