PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021638261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 327aa MW: 36312.5 Da PI: 5.234 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.6 | 1.6e-14 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++ G g+W+ +ar g+ R++k+c++rw +yl XP_021638261.1 19 KGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 66 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_021638261.1 72 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 115 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 327 aa Download sequence |
MRKPEASGKN NNNNNKLRKG LWSPEEDDKL MNYMLNNGQG CWSDVARNAG LQRCGKSCRL 60 RWINYLRPDL KRGAFSPQEE ELIIHLHSLL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR 120 LKNLSSSASP NTSNSSSEPS KEVAAALGEG FISMQEQSMT PMYIYPSLSS SSSSNTSMQA 180 MFLNQMMDPL PTFDHGLSTC GASVYFNNDA PPCMTHIGVS GDDIYGNQGI LGGVNIGIEG 240 ELHIPPLESI SIEENAKTED MYGSNNNKYP YSNVNRINSN CNNNTKAESM TTGVGRQGEE 300 LKVGDWDLEE LMKDVSSFPF LDIFQAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G12870.1 | 3e-67 | MYB family protein |