PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 27385.2 Da PI: 6.5192 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.2e-20 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a++k++g XP_021637727.1 55 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAALAYDKAALKFKG 104 7********.**********94....45************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MSAMVSALSQ VIATTTGDNP TMVQSTPLAA EQSIVKEEPG QPQPTQDQDN TRRRHYRGVR 60 QRPWGKWAAE IRDPKKAARV WLGTFDTAED AALAYDKAAL KFKGTKAKLN FPERVQGKPE 120 FSYFMTSGGS SVSPEQNPTP VAIPAPSHRL PPTPPSFPQE TYPDLLHYAQ ILSSNDANFP 180 YYTSTLFNQQ QPYVPHYPSN FSSQQQQQQH QFQQQDPMRF SPWFDSSSSS DYQEHEDSSK 240 PSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-44 | ERF family protein |