PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637131.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 389aa MW: 42941.5 Da PI: 4.8233

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l +++ G g W++ ++ g+ R++k+c++rw +yl XP_021637131.1 14 KGRWTAEEDEILTKYILANGEGLWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.5	5.5e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE e +v+++ lG++ W++Ia++++ gRt++++k++w+++l XP_021637131.1 67 RGNITKEEKETIVKLHSALGNR-WSLIAAHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MGRAPCCEKV GIKKGRWTAE EDEILTKYIL ANGEGLWRSL PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI TKEEKETIVK LHSALGNRWS LIAAHLPGRT DNEIKNYWNS HLSRKIYSFS 120 KNDYLSTTGT TITSLNIANT ARPRESRGGR MDRSTFKKHM GNTSMSAAKP KSETLTEVVV 180 PEGPEPPSPN NNSTGQFDQG NQLMGLVPES STSELDTATR DVVEGSSSCI GSGERLNAAG 240 PVCLRKEGET EGWGPYEWLD SEINRLKYVL QSEAVDPSGN NCDTIDDTLN KEIENNRVRV 300 GISEGTGNEV VGPDQVAAAN DQEIESSSTT AWSSNAESGE LHNCGSPPPF DEDWHNLSFD 360 WDGTGAIDDS AIIRELWDEG EKIMSWLWS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MGRAPCCEKV GIKKGRWTAE EDEILTKYIL ANGEGLWRSL PKNAGLLRCG KSCRLRWINY  60
LRADLKRGNI TKEEKETIVK LHSALGNRWS LIAAHLPGRT DNEIKNYWNS HLSRKIYSFS  120
KNDYLSTTGT TITSLNIANT ARPRESRGGR MDRSTFKKHM GNTSMSAAKP KSETLTEVVV  180
PEGPEPPSPN NNSTGQFDQG NQLMGLVPES STSELDTATR DVVEGSSSCI GSGERLNAAG  240
PVCLRKEGET EGWGPYEWLD SEINRLKYVL QSEAVDPSGN NCDTIDDTLN KEIENNRVRV  300
GISEGTGNEV VGPDQVAAAN DQEIESSSTT AWSSNAESGE LHNCGSPPPF DEDWHNLSFD  360
WDGTGAIDDS AIIRELWDEG EKIMSWLWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-75	MYB family protein