PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021637029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 170aa MW: 19890.9 Da PI: 9.5915 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.5 | 4.3e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaevav+ifs++g+l e+ss XP_021637029.1 9 KRIENATSRQVTFSKRRKGLLKKAYELSVLCDAEVAVLIFSQKGRLCEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 63.4 | 8.2e-22 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +e+ ++l e++ k+ie+L+ +qR++lG+dL s sl+eLq++ +qLeks++kiR++K+el++eqie+l+ ke+ l +en + r+k XP_021637029.1 82 DTEQYIQHLVSESTEKVKKIEQLEISQRKILGQDLASSSLEELQEMHSQLEKSISKIRARKDELFKEQIEKLKAKERLLLDENASYREK 170 567778999999999999*****************************************************************988765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 170 aa Download sequence |
MVRGKIEMKR IENATSRQVT FSKRRKGLLK KAYELSVLCD AEVAVLIFSQ KGRLCEFSSN 60 DMQKTIERYG KHAKEVQDDR VDTEQYIQHL VSESTEKVKK IEQLEISQRK ILGQDLASSS 120 LEELQEMHSQ LEKSISKIRA RKDELFKEQI EKLKAKERLL LDENASYREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G62165.3 | 8e-73 | MIKC_MADS family protein |