PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636929.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1734aa MW: 195537 Da PI: 5.8361

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	5.2e-19	31	87	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r+eL++klgL++rq ++WF+ rR k+kk XP_021636929.1 31 RPKRQMKTPFQLEVLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKK 87 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1734 aa Download sequence
MEANSEGDYQ NTDGNDNNNN NVGNSNEGQS RPKRQMKTPF QLEVLEKAYA LETYPSEAMR 60 AELSQKLGLS DRQLQMWFCH RRLKDKKETP AKKPRKAVPL MESPVEEMRA VGTEPGSDYG 120 SGSGSGSSPF MEPRKASLDD VSMMRRFYES SPQSVMELRA IACVEAQLGE PLREDGPILG 180 MEFDPLPPDA FGAPIVAMVE HQKRSMHSYD GKVYERHDAK SSKASARAFH DFLQDSSIRS 240 DAYGQVAQSP YRDPPVDISR GKTSFVHEDE PLAKVQGARH LSQQDKRGQI FTSLHRDDDY 300 PVHHDFFTNN RISAQSIAHP IAGSENADIF PNAQVFHTDT DLRIGKKRKN DEARIAREVE 360 AHENQIRKEL EKQDQLRRKS EERMRKEMER HERERRKEEE RLMRERQREE ERSLREQKRE 420 LERREKFLQK EYLRAEKRRQ KEELQREREA VKRQAAIEKA TARRIAKESM DLIEDVQLEL 480 MELAAASKGQ TSIVHLNYET LQNLDSFRDS LRMFPPESVQ LKKPFAIQPW IDSEENIGNL 540 LMVWRFVITF ADVLGLWPFT LDEFVQAFHD YDSRLLGEVH VALLKLIIKD IEDVARTPST 600 GLGSNQYCSA NPEGGHLLIV EGAYMWGFDI RNWQRHLNPL TWPEIFRQLA LSAGFGPRLK 660 KRNSTRTYFG DNDEVKGCEN TISTLRNGSA AENAFALMRE RGLLLPRRSR HRLTPGTVKF 720 AAFHVLSLEG SKGLTVLELA DKIQKSGLRD LTTSKTPEAS ISVALTRDQK LFERIAPSTY 780 CVRAAYRKDP ADGEAILSAA RKKIQVFENG FLGGEDADDA ERDEDSEGDV DEDPEVDDLA 840 IPLSATRSAD KSSEANTCSG SGKNSICNGI PLIEQNEPVK ESSSVHLNGP KDAKTLSSVE 900 QRVPHGDVGV RNIDQENIEI DESKSGESWI QGLAEGEYAH LSVEERLNAL VALVGLANEG 960 NAIRSVLEDR LEAANALKKQ MWAEAQSDRS RLKEDIVSAL DFPSSIGGKA EMQVTISAVE 1020 GSQSPLPFVD SKNKEASPST TGDQKPLLAS GNVQNHLNSV PTEKTLMVQD LSMNPDNFAS 1080 QQHGYASKRS RSQLKAYIGH IAEETYVYRS LPLGQDRRRN RYWQFVASAS KNDPCSGRIF 1140 VELNDGNWRL IDCERAFDAL LSSLDTRGIR ESHLRIMFQK IEKSFKENVR RNLQSEDIIC 1200 QNGTTAENEA GEADSSPNCS AGISSPSSMV CGSNLDTLDT FSFFRIELGR NEIEKKGAMK 1260 RYQDFQKWMW KECFNSLTLC SMKYGKKRCS QILTTCDWCF DSFLTEDTHC DSCHQTFNAV 1320 NKSYNFSEHG VQCKVKRKLN HRICDASLPL GIRLLKALLA FIEVSVPPEG LESFWMENHR 1380 KTWATKLNVS LSTEELLQIL TVLESAIKRD CLSADFETTK DLLSSSTSAQ SALYGSTDLR 1440 SVPVLPWIPK TTAAVALRLF ELDGSITYIQ HEKVEPSEDK PVKVYMLPSR YSLLKSKEVE 1500 RKRLKQSEHV KGDNVTDLRS KRNSKKRRRG GRDQGYGTKW QRRAPGLKSD ANRRNARETE 1560 KFNLGSKQGR KTNTQGSSRG RRTVRKRRAE MMVAEEALIG RMTNTVGPKN YGGSLRNLGK 1620 EDWGIEKVRM DVDDADNSNS MEAAESDDNV EADEYEQVNW DQSVNGASSR WNRNVLEVSD 1680 DDGDASGDDN GIEEMGAEES EGDVEISEGS EGVGNKIEND EGTDTADSDD YISD

Sequence ? help Back to Top

Protein Sequence Length: 1734 aa Download sequence

MEANSEGDYQ NTDGNDNNNN NVGNSNEGQS RPKRQMKTPF QLEVLEKAYA LETYPSEAMR  60
AELSQKLGLS DRQLQMWFCH RRLKDKKETP AKKPRKAVPL MESPVEEMRA VGTEPGSDYG  120
SGSGSGSSPF MEPRKASLDD VSMMRRFYES SPQSVMELRA IACVEAQLGE PLREDGPILG  180
MEFDPLPPDA FGAPIVAMVE HQKRSMHSYD GKVYERHDAK SSKASARAFH DFLQDSSIRS  240
DAYGQVAQSP YRDPPVDISR GKTSFVHEDE PLAKVQGARH LSQQDKRGQI FTSLHRDDDY  300
PVHHDFFTNN RISAQSIAHP IAGSENADIF PNAQVFHTDT DLRIGKKRKN DEARIAREVE  360
AHENQIRKEL EKQDQLRRKS EERMRKEMER HERERRKEEE RLMRERQREE ERSLREQKRE  420
LERREKFLQK EYLRAEKRRQ KEELQREREA VKRQAAIEKA TARRIAKESM DLIEDVQLEL  480
MELAAASKGQ TSIVHLNYET LQNLDSFRDS LRMFPPESVQ LKKPFAIQPW IDSEENIGNL  540
LMVWRFVITF ADVLGLWPFT LDEFVQAFHD YDSRLLGEVH VALLKLIIKD IEDVARTPST  600
GLGSNQYCSA NPEGGHLLIV EGAYMWGFDI RNWQRHLNPL TWPEIFRQLA LSAGFGPRLK  660
KRNSTRTYFG DNDEVKGCEN TISTLRNGSA AENAFALMRE RGLLLPRRSR HRLTPGTVKF  720
AAFHVLSLEG SKGLTVLELA DKIQKSGLRD LTTSKTPEAS ISVALTRDQK LFERIAPSTY  780
CVRAAYRKDP ADGEAILSAA RKKIQVFENG FLGGEDADDA ERDEDSEGDV DEDPEVDDLA  840
IPLSATRSAD KSSEANTCSG SGKNSICNGI PLIEQNEPVK ESSSVHLNGP KDAKTLSSVE  900
QRVPHGDVGV RNIDQENIEI DESKSGESWI QGLAEGEYAH LSVEERLNAL VALVGLANEG  960
NAIRSVLEDR LEAANALKKQ MWAEAQSDRS RLKEDIVSAL DFPSSIGGKA EMQVTISAVE  1020
GSQSPLPFVD SKNKEASPST TGDQKPLLAS GNVQNHLNSV PTEKTLMVQD LSMNPDNFAS  1080
QQHGYASKRS RSQLKAYIGH IAEETYVYRS LPLGQDRRRN RYWQFVASAS KNDPCSGRIF  1140
VELNDGNWRL IDCERAFDAL LSSLDTRGIR ESHLRIMFQK IEKSFKENVR RNLQSEDIIC  1200
QNGTTAENEA GEADSSPNCS AGISSPSSMV CGSNLDTLDT FSFFRIELGR NEIEKKGAMK  1260
RYQDFQKWMW KECFNSLTLC SMKYGKKRCS QILTTCDWCF DSFLTEDTHC DSCHQTFNAV  1320
NKSYNFSEHG VQCKVKRKLN HRICDASLPL GIRLLKALLA FIEVSVPPEG LESFWMENHR  1380
KTWATKLNVS LSTEELLQIL TVLESAIKRD CLSADFETTK DLLSSSTSAQ SALYGSTDLR  1440
SVPVLPWIPK TTAAVALRLF ELDGSITYIQ HEKVEPSEDK PVKVYMLPSR YSLLKSKEVE  1500
RKRLKQSEHV KGDNVTDLRS KRNSKKRRRG GRDQGYGTKW QRRAPGLKSD ANRRNARETE  1560
KFNLGSKQGR KTNTQGSSRG RRTVRKRRAE MMVAEEALIG RMTNTVGPKN YGGSLRNLGK  1620
EDWGIEKVRM DVDDADNSNS MEAAESDDNV EADEYEQVNW DQSVNGASSR WNRNVLEVSD  1680
DDGDASGDDN GIEEMGAEES EGDVEISEGS EGVGNKIEND EGTDTADSDD YISD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	88	RRLKDKKE
2	346	372	KKRKNDEARIAREVEAHENQIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein