PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021636928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | HB-other | ||||||||
Protein Properties | Length: 1734aa MW: 195537 Da PI: 5.8361 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.6 | 5.2e-19 | 31 | 87 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++++ + yps+++r+eL++klgL++rq ++WF+ rR k+kk XP_021636928.1 31 RPKRQMKTPFQLEVLEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKK 87 579****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1734 aa Download sequence |
MEANSEGDYQ NTDGNDNNNN NVGNSNEGQS RPKRQMKTPF QLEVLEKAYA LETYPSEAMR 60 AELSQKLGLS DRQLQMWFCH RRLKDKKETP AKKPRKAVPL MESPVEEMRA VGTEPGSDYG 120 SGSGSGSSPF MEPRKASLDD VSMMRRFYES SPQSVMELRA IACVEAQLGE PLREDGPILG 180 MEFDPLPPDA FGAPIVAMVE HQKRSMHSYD GKVYERHDAK SSKASARAFH DFLQDSSIRS 240 DAYGQVAQSP YRDPPVDISR GKTSFVHEDE PLAKVQGARH LSQQDKRGQI FTSLHRDDDY 300 PVHHDFFTNN RISAQSIAHP IAGSENADIF PNAQVFHTDT DLRIGKKRKN DEARIAREVE 360 AHENQIRKEL EKQDQLRRKS EERMRKEMER HERERRKEEE RLMRERQREE ERSLREQKRE 420 LERREKFLQK EYLRAEKRRQ KEELQREREA VKRQAAIEKA TARRIAKESM DLIEDVQLEL 480 MELAAASKGQ TSIVHLNYET LQNLDSFRDS LRMFPPESVQ LKKPFAIQPW IDSEENIGNL 540 LMVWRFVITF ADVLGLWPFT LDEFVQAFHD YDSRLLGEVH VALLKLIIKD IEDVARTPST 600 GLGSNQYCSA NPEGGHLLIV EGAYMWGFDI RNWQRHLNPL TWPEIFRQLA LSAGFGPRLK 660 KRNSTRTYFG DNDEVKGCEN TISTLRNGSA AENAFALMRE RGLLLPRRSR HRLTPGTVKF 720 AAFHVLSLEG SKGLTVLELA DKIQSGLRDL TTSKTPEASI SVALTRDQKL FERIAPSTYC 780 VRAAYRKDPA DGEAILSAAR KKIQVFENGF LGGEDADDAE RDEDSEGDVD EDPEVDDLAI 840 PLSATRSADK SSEANTCSGS GKNSICNGIP LIEQNEPVKE SSSVHLNGPK DAKTLSSVEQ 900 RVPHGDVGVR NIDQENIEID ESKSGESWIQ GLAEGEYAHL SVEERLNALV ALVGLANEGN 960 AIRSVLEDRL EAANALKKQM WAEAQSDRSR LKEDIVSALD FPSSIGGKAE MQVTISAVEG 1020 SQSPLPFVDS KNKEASPSTT GDQKPLLASG NVQNHLNSVP TEKTLMVQDL SMNPDNFASQ 1080 QHGYASKRSR SQLKAYIGHI AEETYVYRSL PLGQDRRRNR YWQFVASASK NDPCSGRIFV 1140 ELNDGNWRLI DCERAFDALL SSLDTRGIRE SHLRIMFQKI EKSFKENVRR NLQSEDIICQ 1200 NGTTAENEAG EADSSPNCSA GISSPSSMVC GSNLDTLDTF SFFRIELGRN EIEKKGAMKR 1260 YQDFQKWMWK ECFNSLTLCS MKYGKKRCSQ ILTTCDWCFD SFLTEDTHCD SCHQTFNAVN 1320 KSYNFSEHGV QCKVKRKLNH RICDASLPLG IRLLKALLAF IEVSVPPEGL ESFWMENHRK 1380 TWATKLNVSL STEELLQILT VLESAIKRDC LSADFETTKD LLSSSTSAQS ALYGSTDLRS 1440 VPVLPWIPKT TAAVALRLFE LDGSITYIQH EKVEPSEDKP VKVYMKLPSR YSLLKSKEVE 1500 RKRLKQSEHV KGDNVTDLRS KRNSKKRRRG GRDQGYGTKW QRRAPGLKSD ANRRNARETE 1560 KFNLGSKQGR KTNTQGSSRG RRTVRKRRAE MMVAEEALIG RMTNTVGPKN YGGSLRNLGK 1620 EDWGIEKVRM DVDDADNSNS MEAAESDDNV EADEYEQVNW DQSVNGASSR WNRNVLEVSD 1680 DDGDASGDDN GIEEMGAEES EGDVEISEGS EGVGNKIEND EGTDTADSDD YISD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 88 | RRLKDKKE |
2 | 346 | 372 | KKRKNDEARIAREVEAHENQIRKELEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |