PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636812.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 764aa MW: 83454.2 Da PI: 6.6364

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50	5.8e-16	468	506	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk XP_021636812.1 468 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 506 589**********************************96 PP
2	TCR	50.5	4.2e-16	551	589	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_021636812.1 551 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNA 589 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 764 aa Download sequence
MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPVKSVHIT QALHSLSFGS LPSIFTSPHL 60 SSNKESRFLR RHHYSDPSKS EFSSENGNKV SSDEGTALDV AQSYDNSAEL QENFNPGASI 120 GEVSVEPPSE DLRFAVELPR RLKYGCGSPE YDPTPRCGPQ IDCSSELAGI SRKCSPEREM 180 HLQRVYQAEQ KKEATDCDWE SLISDSNDLL IFNSPTDTEA FKGLMQKSLD LGTSFSASLG 240 EVHKVQIGPS TQPGETIVPK EINQKRDNLA DNGNPNECTT SNPNEDVDNE VGMSAGAVSK 300 AVSILHRGIR RRCLDFEMAG ARRKNLGDSS NLTTSVGGQS DEKIASIDKR FFPFKPGSDS 360 SRCVLPGIGL HLNALAITSK DSKNVKHETL SSGISVPSTV APCPSQNSGQ ELNESLSLAS 420 TDIDIDPTEN EAPFVEDVPQ ASACLVTEEF NHSSAKKKRR KLEGESEACK RCNCKKSKCL 480 KLYCECFAAG VYCIEPCSCQ ECFNKPIHED TVLSTRKQIE SRNPLAFAPK VIRSSETATE 540 DESSKTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSAPAE 600 IEAEAETEDE TEGHEKSGVD KISQKTEIQN NEEQNPNSAL PMTPLAFCRA RPLLQLPFSS 660 KSKPPRSFLS IGSSSGLYTS QKYGKPNILR PQPKFETQVQ TIHDDDMPEI LRGNYSPSNG 720 IKTSPNSKRV SPPHSILGSS PAQRSGRKLI LQSIPSFPSL TPQH

Sequence ? help Back to Top

Protein Sequence Length: 764 aa Download sequence

MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPVKSVHIT QALHSLSFGS LPSIFTSPHL  60
SSNKESRFLR RHHYSDPSKS EFSSENGNKV SSDEGTALDV AQSYDNSAEL QENFNPGASI  120
GEVSVEPPSE DLRFAVELPR RLKYGCGSPE YDPTPRCGPQ IDCSSELAGI SRKCSPEREM  180
HLQRVYQAEQ KKEATDCDWE SLISDSNDLL IFNSPTDTEA FKGLMQKSLD LGTSFSASLG  240
EVHKVQIGPS TQPGETIVPK EINQKRDNLA DNGNPNECTT SNPNEDVDNE VGMSAGAVSK  300
AVSILHRGIR RRCLDFEMAG ARRKNLGDSS NLTTSVGGQS DEKIASIDKR FFPFKPGSDS  360
SRCVLPGIGL HLNALAITSK DSKNVKHETL SSGISVPSTV APCPSQNSGQ ELNESLSLAS  420
TDIDIDPTEN EAPFVEDVPQ ASACLVTEEF NHSSAKKKRR KLEGESEACK RCNCKKSKCL  480
KLYCECFAAG VYCIEPCSCQ ECFNKPIHED TVLSTRKQIE SRNPLAFAPK VIRSSETATE  540
DESSKTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSIN CRCEGCKNAF GRKDGSAPAE  600
IEAEAETEDE TEGHEKSGVD KISQKTEIQN NEEQNPNSAL PMTPLAFCRA RPLLQLPFSS  660
KSKPPRSFLS IGSSSGLYTS QKYGKPNILR PQPKFETQVQ TIHDDDMPEI LRGNYSPSNG  720
IKTSPNSKRV SPPHSILGSS PAQRSGRKLI LQSIPSFPSL TPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	460	KKKRR
2	456	461	KKKRRK
3	457	461	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-162	CPP family protein