PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636811.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 766aa MW: 83610.4 Da PI: 6.6364

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50	5.8e-16	468	506	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C++C+Nk XP_021636811.1 468 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKP 506 589**********************************96 PP
2	TCR	50.5	4.2e-16	553	591	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_021636811.1 553 RHKRGCNCKKSSCLKKYCECYQGGVGCSINCRCEGCKNA 591 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPVKSVHIT QALHSLSFGS LPSIFTSPHL 60 SSNKESRFLR RHHYSDPSKS EFSSENGNKV SSDEGTALDV AQSYDNSAEL QENFNPGASI 120 GEVSVEPPSE DLRFAVELPR RLKYGCGSPE YDPTPRCGPQ IDCSSELAGI SRKCSPEREM 180 HLQRVYQAEQ KKEATDCDWE SLISDSNDLL IFNSPTDTEA FKGLMQKSLD LGTSFSASLG 240 EVHKVQIGPS TQPGETIVPK EINQKRDNLA DNGNPNECTT SNPNEDVDNE VGMSAGAVSK 300 AVSILHRGIR RRCLDFEMAG ARRKNLGDSS NLTTSVGGQS DEKIASIDKR FFPFKPGSDS 360 SRCVLPGIGL HLNALAITSK DSKNVKHETL SSGISVPSTV APCPSQNSGQ ELNESLSLAS 420 TDIDIDPTEN EAPFVEDVPQ ASACLVTEEF NHSSAKKKRR KLEGESEACK RCNCKKSKCL 480 KLYCECFAAG VYCIEPCSCQ ECFNKPIHED TVLSTRKQIE SRNPLAFAPK VIRSSETATE 540 VGDESSKTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS INCRCEGCKN AFGRKDGSAP 600 AEIEAEAETE DETEGHEKSG VDKISQKTEI QNNEEQNPNS ALPMTPLAFC RARPLLQLPF 660 SSKSKPPRSF LSIGSSSGLY TSQKYGKPNI LRPQPKFETQ VQTIHDDDMP EILRGNYSPS 720 NGIKTSPNSK RVSPPHSILG SSPAQRSGRK LILQSIPSFP SLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPVKSVHIT QALHSLSFGS LPSIFTSPHL  60
SSNKESRFLR RHHYSDPSKS EFSSENGNKV SSDEGTALDV AQSYDNSAEL QENFNPGASI  120
GEVSVEPPSE DLRFAVELPR RLKYGCGSPE YDPTPRCGPQ IDCSSELAGI SRKCSPEREM  180
HLQRVYQAEQ KKEATDCDWE SLISDSNDLL IFNSPTDTEA FKGLMQKSLD LGTSFSASLG  240
EVHKVQIGPS TQPGETIVPK EINQKRDNLA DNGNPNECTT SNPNEDVDNE VGMSAGAVSK  300
AVSILHRGIR RRCLDFEMAG ARRKNLGDSS NLTTSVGGQS DEKIASIDKR FFPFKPGSDS  360
SRCVLPGIGL HLNALAITSK DSKNVKHETL SSGISVPSTV APCPSQNSGQ ELNESLSLAS  420
TDIDIDPTEN EAPFVEDVPQ ASACLVTEEF NHSSAKKKRR KLEGESEACK RCNCKKSKCL  480
KLYCECFAAG VYCIEPCSCQ ECFNKPIHED TVLSTRKQIE SRNPLAFAPK VIRSSETATE  540
VGDESSKTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS INCRCEGCKN AFGRKDGSAP  600
AEIEAEAETE DETEGHEKSG VDKISQKTEI QNNEEQNPNS ALPMTPLAFC RARPLLQLPF  660
SSKSKPPRSF LSIGSSSGLY TSQKYGKPNI LRPQPKFETQ VQTIHDDDMP EILRGNYSPS  720
NGIKTSPNSK RVSPPHSILG SSPAQRSGRK LILQSIPSFP SLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	460	KKKRR
2	456	461	KKKRRK
3	457	461	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-166	CPP family protein