PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021636636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 2147aa MW: 234915 Da PI: 8.5112 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 17.3 | 8.7e-06 | 2022 | 2043 | 6 | 27 |
-SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27 C+++ +tG C+ G++Ck +H++ XP_021636636.1 2022 CPTYEATGSCPQGSKCKLHHPK 2043 *****************99985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 2147 aa Download sequence |
MDPRSPYLHH TRYVPRHPQP PPPPPQSHPH PDHPFPNNPN IYASHHSTLI AAPPPPPLRP 60 QPRPPPTPSY HSLPTPPQFN PHDSQFSYNP NTFNSNHPRS HADVHNFTQS PPLMHHKPFD 120 DDLPRRLPNY IRDSRPDLRD PPRVLPDRWP SRPYPPANVD SDSYRRPLDN QPMSPMKIRR 180 ELEGNSRFIE EHKQREELRL GRGDDNYHRR SQFGSTSDRS SRDFRMVSNQ MNQSSPCENL 240 RGLPYDNRMN ENQRWVHGRE VNGDAHYSFI ERGSNEIGDP SEIRVATGKR EHYRCREVNA 300 QLERHSSKGS REDSYEFSRT SRKPLQKKSV LLRIQKPNYR NREDERVHYL GYLDDNKSSS 360 FRGKDQNLYQ NHEMGEQVRE GSPVELDVSF KSNSLVAKAI ATPSSTGVSD LHLTPKNEKV 420 RKVVGLNKDS SSSSAIKPNE GIVKLENAVL VANNASSSDM DLLQSKVEVT ASVTGNVQVS 480 GSLPGSSGTK TSPGNSKVES STKVSVSNKG GTNVISGKTS SLKVAKKKKI VKRVVKKVIN 540 PLSSSSSQPT TKCDGSVTAY GVAHGLPASS EPEKSSALAS VDIVDSQPHL NETNVVPETE 600 NDRVEGFAKV LESDNDTITD SSGLRFPNIK RKRSHSTSPL GSSSHEESKI NGNLANGNSA 660 NYLHGMSSTD KDFSKLLNEN TSSDMDSVEP ASKQLCLDGG SFLLENNTAS LSPKVLGMET 720 NSAEGNTDFG FLSSEEIKIQ EGPASSYNIT LGCDSDSGLI SDGITVSNIG TTDVSCKEPC 780 TNQGKPLAEN GVVDQCLNAN FSVGSGKIFC ESNSGERTIQ NVDTCASCSN EVRTIYSSNS 840 GHIISGEIDF SSNGTIDDVC GRPSSDKVST LENVPTGGSL NCTISTDGSK EDTPNIKKSN 900 KNVEMPQLHV SKSEVNNSYL KPVNMVNSAT WVDTTLRLSF KDPTPTEFTV SGDVCGNVGL 960 RGCTDGISDF CLRSSPDALE ANASGNSTVN VGPSGTSKQN QKKRKFSGSQ LESTCLIASG 1020 ESEGPLTAGI SVSAVEVPCN SGNGLMQPEP EMTVSAMNPL FTSDFPPLKK QITEPLDNCS 1080 VGGYHGTEDS LIDGFEDSGL RGVHSCSTVW ELAVQKVQSP CPSGSEGKQI AEATLVMAGS 1140 SHQNNSILIE SGEAEKMEVD TGEEQDIADS GTAQCQFPSE LQVPDSDERL PGTDVENDSC 1200 QHIKNDLPSM SSYLSSLGDG KEVSATNSSG AVMGLVSDTL PDMLSTSHIQ LSIEKGGGDD 1260 EILLGKRAIK GGSNISVVTS GSPNTEINFN SDHGVENDHS FSGKTGLLPS QDSINSTQMG 1320 NTMSGEVYGR KNQPNQAVSR IYPGRSSVVF ASSKNTASST HISKPRTWHR ADNSSTFGQP 1380 GNKAFSSTVP TQRKLHKQIT KFENTSYIRK GNSLVRKPTT MAAQSQSSHG LSSSVYRLNS 1440 SGTDEVKKNA GSDIRTGVVD PSNFVRTGAN AAFERPRTPP LASATKLPNH ASSFLGNFTS 1500 SPLAEPLHNC ATETASDHMT STASNDVLNS SENAIIISEN PMTQTGQINN LDCHNELNDG 1560 NALSSNANSV TYVKRKSNQL VATSNPSSLS VYNAHNAPAL PSDGYYKRRK NQLVRTSLES 1620 HVQPAFIMPE ESVNPEGQAP HNITSSRSSS KRRSRKAVTK THKPLKFALV WTQRSAQLLN 1680 DDDDSLHRHK FLPHLFPWKR ATYWRSFITN SAANPSNNSS SAISRKLLLS RKRDTVYTRS 1740 KHGFSLRKSK VLSVGGSSLK WSKSIERRSK KASEEATLAV AEAERKKREQ SGASCVVSGT 1800 MNRNSSSRKS VPSINLHSGE RIFQIGSFRY KMDSSRRTLQ RISDDDSSYS AAFQTEKDFK 1860 RSYVPRRLVI GKDEYVRIGN GNQLVRDPKK RTRILASEKV RWSLHTARSR LARKRKYCQF 1920 FTRFGKCNKD DGKCPYIHDS SKIAVCTKFL NGLCFNSDCK LTHKVIPERM PDCSYYLQGL 1980 CTNKNCPYRH VHVNPNAFTC EGFLRGYCAD GNECRKKHSY VCPTYEATGS CPQGSKCKLH 2040 HPKNRSKGKK SKQSREKKID QGRYFGSTHI NVSEPGTAVS ETHSAQDNSK ICFEGSIADY 2100 MILDVADAVR ENINLADEQT SFSEGDPLDL KLVDPDELIK PIRIMTT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 630 | 635 | KRKRSH |