PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021636068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB_related | ||||||||
Protein Properties | Length: 78aa MW: 8862.55 Da PI: 4.3953 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34 | 6.7e-11 | 27 | 68 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 r ++++E+ l+++ +++ G + W++Ia +++ gRt++++ +w XP_021636068.1 27 RPDFSEDEESLIARMFRLVGER-WSLIAGRIP-GRTAEEIEKYW 68 5679******************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence |
MGDSLDHTSN DTTSDDSKAD VKSQDSRPDF SEDEESLIAR MFRLVGERWS LIAGRIPGRT 60 AEEIEKYWTS KYSSSSER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 4e-19 | MYB_related family protein |