PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31468.8 Da PI: 9.446 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll+++++ G g+W++ +++ g+ R++k+c++rw +yl XP_021635903.1 14 RGPWTPREDTLLIKYIEARGEGNWRSLPKKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E++l+++ +++lG++ W++Ia +++ gRt++++k++w+++l XP_021635903.1 67 RGNITSDEEDLIIRMHALLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 112 7999******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGRAPCCSKV GLHRGPWTPR EDTLLIKYIE ARGEGNWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TSDEEDLIIR MHALLGNRWS LIAGRLPGRT DNEIKNHWNT HLSKRLRSQG 120 TDPNTHKKLA EPVQQEGNKR KSNKGTSNNK KRKKSKVKVE SLKPKIHLPK PVRFSSLALP 180 RNESFECNTS LSSSTGADGG LSADAVVDNS WCNFKDGDDG ISFLVGDVEH DIVNGTDIEC 240 QTLLPTENHL EKLYDEYLQL LKTDDDQVKL DSFAESLLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 154 | KRKSNKGTSNNKKRKK |
2 | 150 | 154 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-69 | MYB family protein |