PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635802.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 412aa MW: 47459.3 Da PI: 4.2354

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.2	1.6e-16	176	260	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a ++ + +r++l+ W+ev++k++e ++er+ +qC+++++ l+k+ykk+k + + t ++ss+++yf++++ XP_021635802.1 176 WTEHETFVLLDAWGDKFLQRGRKSLRSEEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKEKISLAE-TGGNSSKWVYFKKMD 260 ***********************************762678**********************9.699999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MDDTEDDARY PPNPYGVNHQ QGYGSSNRQK LPVKNATYSR TVGNQYVDVD EEDENEEEEE 60 EDEEELGEDY RENNQNNGIG YVGKDVDDDE EDEDDDDDED PDVDEEEEEE EEDEEGNQKN 120 YSRRIDDVDL EKHPKKRKLK SLVSSYEFAP RVPAPPVTTS SAPKPSFAGR NPLTDWTEHE 180 TFVLLDAWGD KFLQRGRKSL RSEEWQEVAE KVSEVSKIER TDTQCRNRLD TLKKKYKKEK 240 ISLAETGGNS SKWVYFKKMD MLMSTSAQQG GLSCGVDSGE YVFMNPRVYL NRANALDEMR 300 DSPGNSESAD EAEDDSDGLP PKKRKSGRDR SERSSFRLLA VADSIQKFSE IYEKIENNKR 360 QQMLELEKMR MDFHRDLEMQ KRQIMERAQA EIAKIRQGDD DENDLSADNA SG

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MDDTEDDARY PPNPYGVNHQ QGYGSSNRQK LPVKNATYSR TVGNQYVDVD EEDENEEEEE  60
EDEEELGEDY RENNQNNGIG YVGKDVDDDE EDEDDDDDED PDVDEEEEEE EEDEEGNQKN  120
YSRRIDDVDL EKHPKKRKLK SLVSSYEFAP RVPAPPVTTS SAPKPSFAGR NPLTDWTEHE  180
TFVLLDAWGD KFLQRGRKSL RSEEWQEVAE KVSEVSKIER TDTQCRNRLD TLKKKYKKEK  240
ISLAETGGNS SKWVYFKKMD MLMSTSAQQG GLSCGVDSGE YVFMNPRVYL NRANALDEMR  300
DSPGNSESAD EAEDDSDGLP PKKRKSGRDR SERSSFRLLA VADSIQKFSE IYEKIENNKR  360
QQMLELEKMR MDFHRDLEMQ KRQIMERAQA EIAKIRQGDD DENDLSADNA SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	138	KHPKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	4e-72	Trihelix family protein