PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635326.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 653aa MW: 72287.5 Da PI: 6.1889

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.8	6.5e-14	6	54	37	87
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 k++e g++rs+k+C+ek+en+ k+yk++keg+ +r++++s +++f+qlea XP_021635326.1 6 KLAELGYKRSAKKCREKFENVDKYYKRTKEGRAGRQDGKS--YRFFSQLEA 54 7899****************************866665..*****85 PP
2	trihelix	107.7	8e-34	369	454	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +++r++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a XP_021635326.1 369 RWPKAEVLALIKLRSGLDSRYQEAGPKGPLWEEISAGMHRMGYKRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHELDA 454 8*******************************************************************8.99999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MKRWRKLAEL GYKRSAKKCR EKFENVDKYY KRTKEGRAGR QDGKSYRFFS QLEALHNSSS 60 NTSTTTLNLV TASQPIATTI TSLDVAPVSI GIPMPVLSVR LPPSTVGMSS SSTMFPPDLT 120 VTMAPAVAAP PRPSAGISFS STSNGSSSSA SSQEDDEDDY DDDKPSNIAA GPSRKRKRHS 180 SKGGTRRMME SFEGLMKHVM QKQEAMQQRF LEAIEKREHD RMIREEAWKR QEIARQNREQ 240 ELVAQERASY ASRDAAIIAF LQKITGQTIQ LPSPVTIAAV PQPAPPPQPQ PVSLAPVVTV 300 SIQQPPAPQP QAQPHSAALP QQYEQQQHQQ VHHQQSSISS EVAMTVVPEQ EVPPQEIGNI 360 GSLEPTSSRW PKAEVLALIK LRSGLDSRYQ EAGPKGPLWE EISAGMHRMG YKRSSKRCKE 420 KWENINKYFK KVKESNKKRP EDAKTCPYFH ELDALYRKKI LGSSSGGGGG YSTTSSGFAN 480 LNRPEEQQQQ ESMTSDPLPP TKPESRSEVS ATVLAQTSES QTKIGGGADV NTVLPGSLFG 540 EGNGGSAQKP EDIVKEFIKL QGMQRQQQKQ LMLHECEKMD EGDDSDNTED DEDGVEVVGG 600 NEEDDDDDDG DEYDERPQEE RKMAYKIEFQ RQNTNASRSN GGENGTPTFL AMV

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MKRWRKLAEL GYKRSAKKCR EKFENVDKYY KRTKEGRAGR QDGKSYRFFS QLEALHNSSS  60
NTSTTTLNLV TASQPIATTI TSLDVAPVSI GIPMPVLSVR LPPSTVGMSS SSTMFPPDLT  120
VTMAPAVAAP PRPSAGISFS STSNGSSSSA SSQEDDEDDY DDDKPSNIAA GPSRKRKRHS  180
SKGGTRRMME SFEGLMKHVM QKQEAMQQRF LEAIEKREHD RMIREEAWKR QEIARQNREQ  240
ELVAQERASY ASRDAAIIAF LQKITGQTIQ LPSPVTIAAV PQPAPPPQPQ PVSLAPVVTV  300
SIQQPPAPQP QAQPHSAALP QQYEQQQHQQ VHHQQSSISS EVAMTVVPEQ EVPPQEIGNI  360
GSLEPTSSRW PKAEVLALIK LRSGLDSRYQ EAGPKGPLWE EISAGMHRMG YKRSSKRCKE  420
KWENINKYFK KVKESNKKRP EDAKTCPYFH ELDALYRKKI LGSSSGGGGG YSTTSSGFAN  480
LNRPEEQQQQ ESMTSDPLPP TKPESRSEVS ATVLAQTSES QTKIGGGADV NTVLPGSLFG  540
EGNGGSAQKP EDIVKEFIKL QGMQRQQQKQ LMLHECEKMD EGDDSDNTED DEDGVEVVGG  600
NEEDDDDDDG DEYDERPQEE RKMAYKIEFQ RQNTNASRSN GGENGTPTFL AMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-49	Trihelix family protein