PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635309.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 759aa MW: 83164.3 Da PI: 5.2729

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	99.2	3.5e-31	88	172	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laLi++r++m+ ++r++ k+plWe+vs+k++e g++rs+k+C+ek+en+ k+yk++keg+ +r++++s +++f+qlea XP_021635309.1 88 RWPRQETLALIQIRSDMDAAFREATVKGPLWEDVSRKLAELGYKRSAKKCREKFENVDKYYKRTKEGRAGRQDGKS--YRFFSQLEA 172 8*******************************************************************866665..*****85 PP
2	trihelix	107.4	9.9e-34	487	572	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +++r++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a XP_021635309.1 487 RWPKAEVLALIKLRSGLDSRYQEAGPKGPLWEEISAGMHRMGYKRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFHELDA 572 8*******************************************************************8.99999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
MQQGGGVPIQ PQYGAPTSEM TPPATAALGT HMLLAAGTDQ SQQQQLVEEA SPISSRPPAT 60 AGNLDEFMRL SGSGDEADRA EGVASSNRWP RQETLALIQI RSDMDAAFRE ATVKGPLWED 120 VSRKLAELGY KRSAKKCREK FENVDKYYKR TKEGRAGRQD GKSYRFFSQL EALHNSSSNT 180 STTTLNLVTA SQPIATTITS LDVAPVSIGI PMPVLSVRLP PSTVGMSSSS TMFPPDLTVT 240 MAPAVAAPPR PSAGISFSST SNGSSSSASS QEDDEDDYDD DKPSNIAAGP SRKRKRHSSK 300 GGTRRMMESF EGLMKHVMQK QEAMQQRFLE AIEKREHDRM IREEAWKRQE IARQNREQEL 360 VAQERASYAS RDAAIIAFLQ KITGQTIQLP SPVTIAAVPQ PAPPPQPQPV SLAPVVTVSI 420 QQPPAPQPQA QPHSAALPQQ YEQQQHQQVH HQQSSISSEV AMTVVPEQEV PPQEIGNIGS 480 LEPTSSRWPK AEVLALIKLR SGLDSRYQEA GPKGPLWEEI SAGMHRMGYK RSSKRCKEKW 540 ENINKYFKKV KESNKKRPED AKTCPYFHEL DALYRKKILG SSSGGGGGYS TTSSGFANLN 600 RPEEQQQQES MTSDPLPPTK PESRSEVSAT VLAQTSESQT KIGGGADVNT VLPGSLFGEG 660 NGGSAQKGMQ RQQQKQLMLH ECEKMDEGDD SDNTEDDEDG VEVVGGNEED DDDDDGDEYD 720 ERPQEERKMA YKIEFQRQNT NASRSNGGEN GTPTFLAMV

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

MQQGGGVPIQ PQYGAPTSEM TPPATAALGT HMLLAAGTDQ SQQQQLVEEA SPISSRPPAT  60
AGNLDEFMRL SGSGDEADRA EGVASSNRWP RQETLALIQI RSDMDAAFRE ATVKGPLWED  120
VSRKLAELGY KRSAKKCREK FENVDKYYKR TKEGRAGRQD GKSYRFFSQL EALHNSSSNT  180
STTTLNLVTA SQPIATTITS LDVAPVSIGI PMPVLSVRLP PSTVGMSSSS TMFPPDLTVT  240
MAPAVAAPPR PSAGISFSST SNGSSSSASS QEDDEDDYDD DKPSNIAAGP SRKRKRHSSK  300
GGTRRMMESF EGLMKHVMQK QEAMQQRFLE AIEKREHDRM IREEAWKRQE IARQNREQEL  360
VAQERASYAS RDAAIIAFLQ KITGQTIQLP SPVTIAAVPQ PAPPPQPQPV SLAPVVTVSI  420
QQPPAPQPQA QPHSAALPQQ YEQQQHQQVH HQQSSISSEV AMTVVPEQEV PPQEIGNIGS  480
LEPTSSRWPK AEVLALIKLR SGLDSRYQEA GPKGPLWEEI SAGMHRMGYK RSSKRCKEKW  540
ENINKYFKKV KESNKKRPED AKTCPYFHEL DALYRKKILG SSSGGGGGYS TTSSGFANLN  600
RPEEQQQQES MTSDPLPPTK PESRSEVSAT VLAQTSESQT KIGGGADVNT VLPGSLFGEG  660
NGGSAQKGMQ RQQQKQLMLH ECEKMDEGDD SDNTEDDEDG VEVVGGNEED DDDDDGDEYD  720
ERPQEERKMA YKIEFQRQNT NASRSNGGEN GTPTFLAMV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	6e-52	Trihelix family protein