PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021635118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 186aa MW: 20720.4 Da PI: 7.8946 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 216.9 | 6.1e-67 | 2 | 153 | 2 | 170 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 +++ +se+vCyv+CnfCntilavsvPs+ lf++vtvrCGhC++llsvn+a + q+ + ++ ++++l+s ++++++ s+s+ XP_021635118.1 2 SLDLASERVCYVHCNFCNTILAVSVPSSNLFNIVTVRCGHCANLLSVNMAASLQTFPLQDP---------------QKMHLSSEDVNKDCGSSSE 81 567799********************************************99999998884...............5566677777777777777 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ e+ d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_021635118.1 82 KVTA-FESGDHEPPRMPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 153 7766.46788999**999.9****************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
MSLDLASERV CYVHCNFCNT ILAVSVPSSN LFNIVTVRCG HCANLLSVNM AASLQTFPLQ 60 DPQKMHLSSE DVNKDCGSSS EKVTAFESGD HEPPRMPPIR PPEKRQRVPS AYNRFIKEEI 120 QRIKASNPDI SHREAFSTAA KNWAHFPHIH FGLKLDGNKH AKLDHQSFAG EGTQKSNGFY 180 EINGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08465.1 | 3e-78 | YABBY family protein |