PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 859aa MW: 95575.8 Da PI: 4.8789 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.6 | 4.3e-08 | 288 | 307 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C+ff++ G+C +G++C+F H XP_021635061.1 288 ICDFFSK-GWCIRGSSCTFLH 307 8******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 859 aa Download sequence |
MPPPISAAQG SDDDQSPSSS GPPVEISDSD LEKDDQETEI EVEEEEIEND NEEEEYEEII 60 VVEEEEIEEE VEVEEDDMSD SSKEANAKSN DVSQDTEFEG TDRQLGLRST PGRSSLGLPS 120 NSLVEDGVCN SQFSGPLNEP VKLQEELHVN YEDSKKSGTN GENGSQRSLV KNDTEALMIK 180 KKSKEISKHY SDSMAHFFND EAMAAETTSP SSITVNEVTN ALAIKDSLGM ETNGILDSEV 240 DVNPMEKRSE DKEQTTSRFS RLVTLEKRTR SLSPSAEFED QNKRPAVICD FFSKGWCIRG 300 SSCTFLHIKN KTVNAKEQLE GDAAAANFSK RDQFDEGLKN ITEKQKFPGF PDLMAPSIGN 360 SAAFSCQFSS ERILALENGE SQRLHQLDDK HKSLSLQRED LSQGFHSDTQ QFPSSKDDHG 420 VSSSLKNVGI DNLRRSWPAS DYGSYASPIN RGSSPSFQSR LLPELRYSSS FSSVTSSNNH 480 RENSFSYLSS LDNLTYIRDQ FVQGTSLDGS LSSSVMLPSQ QISAWKGPLF SFSSSLNTSP 540 FGSQKLSDND RNYHASRSLR QSASLLFGSE RETSLLTSVS RGPLHYAEHK AKISSNDWEP 600 SIPFRPSFSI TYTVASSPGS QYDPLRDSID LSTTGYRLPF KFSFVSQERS NLNSSHQPIY 660 DNSLSKTLGS ECHNDKSTVS LHGRFHENVL DKNCYTPGKV MGGTCVVSGQ KGTMPKEENA 720 SSSGHLSDVP NTSKIDVDCD SRHEYDAPRH KQDFKVDRVR QKNEMDVDQK TDGESRVLRH 780 FRAALIDFVK ELLRPTWREG HLSKDAHNTI AKKAVEKVLR TLQPHQIPTT VESTRQYLSS 840 SQPKIAKLVE GYCTKYGKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 4e-40 | C3H family protein |