PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021300998.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 417aa MW: 47053.7 Da PI: 4.7167

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021300998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	124	1.3e-38	5	134	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +GfrF+Ptdeel+ eyL+ k+ +++ + +vi+ev di+++ePw+Lp+ ++++ ++ wyf + + ky+++kr +r+t +gyWk tg+ +++++ XP_021300998.1 5 KGFRFRPTDEELI-EYLQDKTFDRDSLV-QVIAEVhDICELEPWELPErsALQTVDRLWYFMYPPKYKYRNSKRISRTTLEGYWKPTGNARKIIN 97 7**********.****999766.8999999******943467778889*******************************99 PP NAM 95 k.kgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +ge++g kktLvfykg ++++ +kt Wvmhey+l XP_021300998.1 98 ThTGEEIGSKKTLVFYKGqcNDKNKNKTCWVMHEYEL 134 878899******8755677889*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MDIVKGFRFR PTDEELIEYL QDKTFDRDSL VQVIAEVHDI CELEPWELPE RSALQTVDRL 60 WYFMYPPKYK YRNSKRISRT TLEGYWKPTG NARKIINTHT GEEIGSKKTL VFYKGQCNDK 120 NKNKTCWVMH EYELTAAEPT HSDHDVLDLK GSSAPEASNG SVGIHTQSSS VETYAGERSN 180 QYNIVNEDKG SNLSSNSVNH VAEEIIPQGR LHLKALSTEP NGPNDNNKVQ NLYSTTEQDD 240 ESCNSILTNN DETDPIERSN QHNVVVTTES FEVPFNLDYL AHEDLIPTEL LYNALLLAEP 300 EATNNSNWIQ NQHITNSGED GESLNSSFAD SNEVSLQEGS SHQSLAAANK GFRLPCIGVM 360 ESPISMEKSR KRPRHEFDGL SHDVQTGEAQ PWGKEYPSSS NKSIESDCYN IIATRKS

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MDIVKGFRFR PTDEELIEYL QDKTFDRDSL VQVIAEVHDI CELEPWELPE RSALQTVDRL  60
WYFMYPPKYK YRNSKRISRT TLEGYWKPTG NARKIINTHT GEEIGSKKTL VFYKGQCNDK  120
NKNKTCWVMH EYELTAAEPT HSDHDVLDLK GSSAPEASNG SVGIHTQSSS VETYAGERSN  180
QYNIVNEDKG SNLSSNSVNH VAEEIIPQGR LHLKALSTEP NGPNDNNKVQ NLYSTTEQDD  240
ESCNSILTNN DETDPIERSN QHNVVVTTES FEVPFNLDYL AHEDLIPTEL LYNALLLAEP  300
EATNNSNWIQ NQHITNSGED GESLNSSFAD SNEVSLQEGS SHQSLAAANK GFRLPCIGVM  360
ESPISMEKSR KRPRHEFDGL SHDVQTGEAQ PWGKEYPSSS NKSIESDCYN IIATRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	2e-32	NAC family protein