PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021300763.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Trihelix
Protein Properties Length: 274aa    MW: 31656.4 Da    PI: 5.8517
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021300763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix62.59.5e-2021106286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt+qe+l Li+a++e++ +l+rg+lk+ +Weev+  +       +    +++ qC++k+e+l++ry+ + +g  +      s +py++ +e
  XP_021300763.1  21 WTHQETLNLIQAYQEKWYSLKRGQLKASQWEEVAXTVaarcglFDDSAAKTALQCRHKMEKLRRRYRSESQGVASA-----SLWPYYEAME 106
                     *************************************998888888999***********************9984.....68******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MSYPSPAADP QPAKKPQPLP WTHQETLNLI QAYQEKWYSL KRGQLKASQW EEVAXTVAAR  60
CGLFDDSAAK TALQCRHKME KLRRRYRSES QGVASASLWP YYEAMETLEH GPLPISARPL  120
TSLVPSRGKN FYSEDGHEVG NIYDNNDDVV EEDEEDAEEE NQFSKSRSIN YILRRPSVVN  180
RFSGLLSGVR KRVRPEGEGD EDVAVVEENR GAELAVEIKR FAERFMRVER KRMEMMQETE  240
RLRMEMENRR IEMILDSQRK IVDVIAASLG RSRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.13e-54Trihelix family protein