PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299833.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 340aa    MW: 36934.1 Da    PI: 4.5503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-18123170253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                     +  GVr++k +g+W+AeIr+p +   ++r++lg+++t eeAaka++a ++++
  XP_021299833.1 123 KPVGVRQRK-WGKWAAEIRHPLK---KTRIWLGTYDTLEEAAKAYDAKKLEF 170
                     789*****9.**********743...5********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MPEPRKQSMD LGKSSKKTKK IQPILTEEET QMTRKVRVIF HDPYATDSSS SEDESEGSVA  60
RKAQRGKRVV REIKVPAFGL VPRLKPLESG TSSQDSNTKT PAGKKRVWSK TLEGKAPLSK  120
TKKPVGVRQR KWGKWAAEIR HPLKKTRIWL GTYDTLEEAA KAYDAKKLEF DALAAAAAAS  180
ASSDKTNEAS CSAVASHNSN SVPSTSEESE SLLSHTSPSS VLELDTSASV SVSNNNGDFE  240
DENNEGLDVN FANLPIPDFC FIDDPLLSGS VGQELNLDAE PADYLLVNDF GMVLEEYCSI  300
EDLSICGIEG DEPSELPDCD FGTDDSLFGE EVAPLNIACP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-44ERF family protein