PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299680.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 396aa    MW: 44006.1 Da    PI: 4.621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1952101255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr+++ +grWvAeI+d      ++ r++lg+++taeeAa+a+++a+  l+g
  XP_021299680.1  52 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTYDTAEEAARAYDEAACLLRG 101
                     789******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MTLRQESMMG KRKLASEGKG NSVDEEVKWE QMVMDSAAAV AAFNGARRAR KRFVGVRQRP  60
SGRWVAEIKD TIQKIRVWLG TYDTAEEAAR AYDEAACLLR GANTRTNFWP FSPSSKPVLP  120
TKIVNLLLLR LKARNNSAAS SMASNSPVNV PGYEPAEGED MCIDDFFNVP EDCRLNTTSS  180
SSTSTTTTSS STTASDCMLE MMTFGSNFAN TENGDHDLKA IHLGNSYIDG GREEKREGSK  240
EEEEIDMEGP LDFQFVDAVG LSCYCSPFEI AEEMVEVPME QQENDGDDPS MLSETMKRMK  300
YERKFSASLY AFHGIPECLR LRHHECAGND KPEHQSNLRN NFNTDKKPEI KEEHEQVGII  360
PETSIETGSS SAYSSLSNGA GEIWSSLDLP PICFMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18ERF family protein