PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297991.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 271aa    MW: 29687.8 Da    PI: 4.8115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-182775355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr ++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_021297991.1 27 FLGVRKRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 75
                    56******.**********965...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MNTSTSKSKK KQTQSQETAG SANGGRFLGV RKRPWGRYAA EIRDPSTKER HWLGTFDTAE  60
EAALAYDRAA RSMRGPRSRT NFVYSDMPPG SSVTSVVSPD ERSHLFVTPS DPDDQTHPNG  120
QLYFNQDSTT TQCHFSSGHP DMPQEDVWGS STSCHQDQPV IDNNGWSYSS KSELPPFPSS  180
FSADSSVTSN SGYGTGQGTW SDQYSSTGVM GWQDDPTRQI NNEFESTGSG SFFGFDTSEY  240
VHSPLFSRMP SVSDTAPDGF DLGGSSSSYF F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.11e-33ERF family protein