PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297825.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family E2F/DP
Protein Properties Length: 369aa    MW: 41867.5 Da    PI: 9.3736
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP75.45.6e-241984171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    rkeksL+ll+++fl+l+++ + +++ l+++a++L    v  +rRRiYD++N+Le+++++++k kn+++wkg
  XP_021297825.1 19 RKEKSLGLLCSNFLELYNHDSIQTIGLDDAASKL---GV--ERRRIYDVVNILESIGVVARKGKNQYSWKG 84
                    79*****************999************...**..****************************98 PP
2E2F_TDP771.8e-24146225271
         E2F_TDP   2 keksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                     +eksL+l+tq+f+kl+ +s+++i+tl+++a +L+ +      +++k+RR+YDi+NV++++nliek     ++k+++rw g
  XP_021297825.1 146 REKSLWLITQNFVKLFLCSDAEIITLDSAAVALLGDvhnstAMRTKVRRLYDIANVFSSMNLIEKthhpeSRKPAFRWLG 225
                     79***************************************************************9999999******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MSSFLSRESE PDSRTFYCRK EKSLGLLCSN FLELYNHDSI QTIGLDDAAS KLGVERRRIY  60
DVVNILESIG VVARKGKNQY SWKGFGEIPR ALEKLKEEAL KENFYISGCN KSLRVLDENE  120
SGGSFNVKID GQDNSSESSK HIDTKREKSL WLITQNFVKL FLCSDAEIIT LDSAAVALLG  180
DVHNSTAMRT KVRRLYDIAN VFSSMNLIEK THHPESRKPA FRWLGWGAKL HNGSTTALAL  240
NESKKRMFGT EIANHSLKRM KANTSVHRKL NQKENMAMHI KHECVEKDNK MEQHLKQSSR  300
GFVFGPFTPG GMPTGNKNER PVGDWESLAS TYKPHYLNQA LSDLFAHYME AWKSWYAEVA  360
GRGETHLSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01330.11e-109E2F/DP family protein