PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296851.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 287aa    MW: 32821.4 Da    PI: 5.748
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like84.98.3e-27222271251
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                     +r++W++eLH+rFvea++ LGG+e+AtPk+i++lm+v+gLt+++vkSHLQ
  XP_021296851.1 222 NRRCWSSELHARFVEALNLLGGIEVATPKQIRDLMQVEGLTIDQVKSHLQ 271
                     79************************************************ PP
2Myb_DNA-binding36.71e-11223271145
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 
                      r  W+ e++ ++v+a ++lGg    t+k I   m+ +g+t  q+ks++q
   XP_021296851.1 223 RRCWSSELHARFVEALNLLGGIevaTPKQIRDLMQvEGLTIDQVKSHLQ 271
                      568*****************88**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MNPTSVDLSL SLKPSYVPKS ISNLLEDLSK IDNESDKLSV LSDYICKHQE ELSTVEALKR  60
ELPQCRLLLM DDAAIEALKE GFKNIEEKME CQSRQPLVEY LPTMRKNRNE QDQREFWQTY  120
SAEEEYWNPI YAKKQKTLVL GSFQPPNLKA VQPCTDRNVE GLGLLSYKEC SSNSLGSPST  180
GKGKEVAIDQ LSRHQSLLYL KVDDQTVNYH PKPLTQPIWK NNRRCWSSEL HARFVEALNL  240
LGGIEVATPK QIRDLMQVEG LTIDQVKSHL QVEFDLIKLN NACMYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.16e-27G2-like family protein